Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 AC098934.4-201ENST00000564127 592 ntBASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 AC010536.3-201ENST00000620306 533 ntBASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 AC133041.1-202ENST00000642053 222 ntBASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
FOXR1Q6PIV2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 NOC2LP1-202ENST00000452600 2235 ntBASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 AC120498.9-201ENST00000339021 3867 ntBASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 AC055733.4-201ENST00000638462 1354 ntBASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
FOXR1Q6PIV2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.45■□□□□ 0.87
FOXR1Q6PIV2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 AC020916.1-201ENST00000587762 1774 ntBASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 CNN2P6-201ENST00000439038 900 ntBASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
FOXR1Q6PIV2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 AC010141.2-201ENST00000452426 721 ntBASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.44■□□□□ 0.86
FOXR1Q6PIV2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 RNA5SP413-201ENST00000516373 109 ntBASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 AC012313.1-201ENST00000593393 3059 ntBASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
FOXR1Q6PIV2 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms