Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 FAM210CP-201ENST00000445714 574 ntBASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CHRFAM7AQ494W8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AC087289.5-201ENST00000586076 3175 ntBASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 TCF3P1-201ENST00000423021 1937 ntBASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CHRFAM7AQ494W8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 AC061975.6-201ENST00000579045 1553 ntBASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 SMG8-203ENST00000578922 2178 ntBASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.18■□□□□ 0.34
CHRFAM7AQ494W8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.17■□□□□ 0.34
CHRFAM7AQ494W8 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms