Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.31■□□□□ 0.52
RFX4Q33E94 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RFX4Q33E94 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RFX4Q33E94 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX4Q33E94 AC005082.1-201ENST00000413042 2259 ntBASIC18.3■□□□□ 0.52
RFX4Q33E94 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX4Q33E94 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RFX4Q33E94 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX4Q33E94 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX4Q33E94 AC019069.1-201ENST00000610008 1333 ntBASIC18.3■□□□□ 0.52
RFX4Q33E94 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX4Q33E94 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.3■□□□□ 0.52
RFX4Q33E94 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX4Q33E94 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.3■□□□□ 0.52
RFX4Q33E94 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX4Q33E94 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.3■□□□□ 0.52
RFX4Q33E94 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
RFX4Q33E94 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RFX4Q33E94 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX4Q33E94 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 AC090340.1-201ENST00000620778 4980 ntBASIC18.29■□□□□ 0.52
RFX4Q33E94 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.29■□□□□ 0.52
RFX4Q33E94 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.29■□□□□ 0.52
RFX4Q33E94 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
RFX4Q33E94 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX4Q33E94 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.29■□□□□ 0.52
RFX4Q33E94 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
RFX4Q33E94 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RFX4Q33E94 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RFX4Q33E94 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
RFX4Q33E94 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX4Q33E94 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX4Q33E94 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX4Q33E94 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX4Q33E94 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.28■□□□□ 0.52
RFX4Q33E94 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
RFX4Q33E94 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RFX4Q33E94 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RFX4Q33E94 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms