Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.71■□□□□ 0.43
CASP6P55212 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.71■□□□□ 0.43
CASP6P55212 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP6P55212 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.71■□□□□ 0.43
CASP6P55212 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASP6P55212 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CASP6P55212 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CASP6P55212 KRT8P17-201ENST00000453110 1448 ntBASIC17.71■□□□□ 0.43
CASP6P55212 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.71■□□□□ 0.43
CASP6P55212 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.7■□□□□ 0.42
CASP6P55212 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CASP6P55212 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 AL390955.1-201ENST00000428694 934 ntBASIC17.7■□□□□ 0.42
CASP6P55212 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.7■□□□□ 0.42
CASP6P55212 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.7■□□□□ 0.42
CASP6P55212 KRT18P57-201ENST00000443599 1254 ntBASIC17.7■□□□□ 0.42
CASP6P55212 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.7■□□□□ 0.42
CASP6P55212 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.7■□□□□ 0.42
CASP6P55212 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.7■□□□□ 0.42
CASP6P55212 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.7■□□□□ 0.42
CASP6P55212 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 Z98882.1-201ENST00000622160 2253 ntBASIC17.7■□□□□ 0.42
CASP6P55212 KRT8P9-201ENST00000558927 1449 ntBASIC17.7■□□□□ 0.42
CASP6P55212 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 AL117328.2-201ENST00000624617 1940 ntBASIC17.7■□□□□ 0.42
CASP6P55212 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CASP6P55212 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CASP6P55212 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CASP6P55212 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CASP6P55212 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.69■□□□□ 0.42
CASP6P55212 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.69■□□□□ 0.42
CASP6P55212 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.69■□□□□ 0.42
CASP6P55212 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.69■□□□□ 0.42
CASP6P55212 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.69■□□□□ 0.42
CASP6P55212 AC026271.3-201ENST00000571884 352 ntBASIC17.69■□□□□ 0.42
CASP6P55212 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.69■□□□□ 0.42
CASP6P55212 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CASP6P55212 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CASP6P55212 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CASP6P55212 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.69■□□□□ 0.42
CASP6P55212 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.69■□□□□ 0.42
CASP6P55212 AL049796.1-201ENST00000565336 1766 ntBASIC17.68■□□□□ 0.42
CASP6P55212 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CASP6P55212 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.68■□□□□ 0.42
CASP6P55212 SLC25A3P1-201ENST00000443844 931 ntBASIC17.68■□□□□ 0.42
CASP6P55212 AC128688.1-201ENST00000487626 519 ntBASIC17.68■□□□□ 0.42
CASP6P55212 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.68■□□□□ 0.42
CASP6P55212 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.68■□□□□ 0.42
CASP6P55212 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.68■□□□□ 0.42
CASP6P55212 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CASP6P55212 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CASP6P55212 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CASP6P55212 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASP6P55212 HCG11-201ENST00000411553 5696 ntBASIC17.67■□□□□ 0.42
CASP6P55212 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASP6P55212 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CASP6P55212 KRT16P6-202ENST00000425692 1426 ntBASIC17.67■□□□□ 0.42
CASP6P55212 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CASP6P55212 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASP6P55212 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CASP6P55212 TERF1P1-201ENST00000311003 1181 ntBASIC17.67■□□□□ 0.42
CASP6P55212 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms