Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
RFC1P35251 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC1P35251 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.77■□□□□ 0.92
RFC1P35251 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC1P35251 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.77■□□□□ 0.92
RFC1P35251 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RFC1P35251 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.77■□□□□ 0.92
RFC1P35251 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
RFC1P35251 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.77■□□□□ 0.91
RFC1P35251 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.77■□□□□ 0.91
RFC1P35251 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
RFC1P35251 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC1P35251 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC1P35251 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC1P35251 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC1P35251 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.76■□□□□ 0.91
RFC1P35251 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.76■□□□□ 0.91
RFC1P35251 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 AC124283.5-201ENST00000624661 1809 ntBASIC20.76■□□□□ 0.91
RFC1P35251 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RFC1P35251 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RFC1P35251 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.76■□□□□ 0.91
RFC1P35251 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 AC018553.1-201ENST00000616682 1458 ntBASIC20.75■□□□□ 0.91
RFC1P35251 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC1P35251 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RFC1P35251 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
RFC1P35251 TREX1-205ENST00000625293 1783 ntBASIC20.75■□□□□ 0.91
RFC1P35251 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC1P35251 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC1P35251 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.75■□□□□ 0.91
RFC1P35251 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RFC1P35251 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC1P35251 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC1P35251 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC1P35251 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.74■□□□□ 0.91
RFC1P35251 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.74■□□□□ 0.91
RFC1P35251 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
RFC1P35251 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.74■□□□□ 0.91
RFC1P35251 AC116351.2-201ENST00000606540 1585 ntBASIC20.74■□□□□ 0.91
RFC1P35251 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.74■□□□□ 0.91
RFC1P35251 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RFC1P35251 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RFC1P35251 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RFC1P35251 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RFC1P35251 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.73■□□□□ 0.91
RFC1P35251 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RFC1P35251 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RFC1P35251 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
RFC1P35251 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.73■□□□□ 0.91
RFC1P35251 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms