Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CHRNA5P30532 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.36■■□□□ 1.49
CHRNA5P30532 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRNA5P30532 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC24.36■■□□□ 1.49
CHRNA5P30532 PRSS44-201ENST00000515154 1146 ntBASIC24.36■■□□□ 1.49
CHRNA5P30532 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC24.36■■□□□ 1.49
CHRNA5P30532 ETFA-216ENST00000560726 942 ntTSL 3 BASIC24.36■■□□□ 1.49
CHRNA5P30532 AC140113.3-201ENST00000605663 199 ntBASIC24.36■■□□□ 1.49
CHRNA5P30532 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CHRNA5P30532 AL031432.5-201ENST00000641059 760 ntBASIC24.36■■□□□ 1.49
CHRNA5P30532 AL049796.1-201ENST00000565336 1766 ntBASIC24.36■■□□□ 1.49
CHRNA5P30532 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CHRNA5P30532 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
CHRNA5P30532 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHRNA5P30532 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRNA5P30532 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CHRNA5P30532 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.35■■□□□ 1.49
CHRNA5P30532 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRNA5P30532 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
CHRNA5P30532 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRNA5P30532 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.35■■□□□ 1.49
CHRNA5P30532 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC24.35■■□□□ 1.49
CHRNA5P30532 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC24.35■■□□□ 1.49
CHRNA5P30532 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.35■■□□□ 1.49
CHRNA5P30532 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
CHRNA5P30532 IRF5-214ENST00000613821 595 ntTSL 5 BASIC24.35■■□□□ 1.49
CHRNA5P30532 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC24.35■■□□□ 1.49
CHRNA5P30532 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CHRNA5P30532 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
CHRNA5P30532 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CHRNA5P30532 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHRNA5P30532 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC24.34■■□□□ 1.49
CHRNA5P30532 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CHRNA5P30532 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.34■■□□□ 1.49
CHRNA5P30532 TSPY17P-201ENST00000450329 467 ntBASIC24.34■■□□□ 1.49
CHRNA5P30532 GXYLT1P6-201ENST00000456472 1187 ntBASIC24.34■■□□□ 1.49
CHRNA5P30532 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 AL353719.1-201ENST00000566847 864 ntBASIC24.34■■□□□ 1.49
CHRNA5P30532 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC24.34■■□□□ 1.49
CHRNA5P30532 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CHRNA5P30532 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CHRNA5P30532 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CHRNA5P30532 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CHRNA5P30532 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.33■■□□□ 1.49
CHRNA5P30532 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.33■■□□□ 1.49
CHRNA5P30532 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
CHRNA5P30532 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.33■■□□□ 1.49
CHRNA5P30532 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 Z85996.1-201ENST00000494644 937 ntBASIC24.33■■□□□ 1.49
CHRNA5P30532 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
CHRNA5P30532 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.33■■□□□ 1.49
CHRNA5P30532 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CHRNA5P30532 DPP3P2-201ENST00000416030 1696 ntBASIC24.33■■□□□ 1.49
CHRNA5P30532 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.48
CHRNA5P30532 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC24.33■■□□□ 1.48
CHRNA5P30532 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHRNA5P30532 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHRNA5P30532 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.32■■□□□ 1.48
CHRNA5P30532 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CHRNA5P30532 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
CHRNA5P30532 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.32■■□□□ 1.48
CHRNA5P30532 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC24.32■■□□□ 1.48
CHRNA5P30532 VENTXP5-201ENST00000523979 775 ntBASIC24.32■■□□□ 1.48
CHRNA5P30532 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.32■■□□□ 1.48
CHRNA5P30532 DFFB-212ENST00000625756 649 ntTSL 5 BASIC24.32■■□□□ 1.48
CHRNA5P30532 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC24.32■■□□□ 1.48
CHRNA5P30532 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CHRNA5P30532 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 DAP-202ENST00000432074 1048 ntTSL 2 BASIC24.31■■□□□ 1.48
CHRNA5P30532 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC24.31■■□□□ 1.48
CHRNA5P30532 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.31■■□□□ 1.48
CHRNA5P30532 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC24.31■■□□□ 1.48
CHRNA5P30532 AC008622.2-201ENST00000617006 1229 ntBASIC24.31■■□□□ 1.48
CHRNA5P30532 AL691432.3-201ENST00000621860 400 ntBASIC24.31■■□□□ 1.48
CHRNA5P30532 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.31■■□□□ 1.48
CHRNA5P30532 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC24.31■■□□□ 1.48
CHRNA5P30532 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CHRNA5P30532 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms