Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.91■□□□□ 0.78
HLA-DPA1P20036 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 RNA5SP413-201ENST00000516373 109 ntBASIC19.9■□□□□ 0.78
HLA-DPA1P20036 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 KRT18P6-201ENST00000555540 1265 ntBASIC19.9■□□□□ 0.78
HLA-DPA1P20036 AL121906.2-201ENST00000621597 723 ntBASIC19.9■□□□□ 0.78
HLA-DPA1P20036 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 AC124283.5-201ENST00000624661 1809 ntBASIC19.9■□□□□ 0.78
HLA-DPA1P20036 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HLA-DPA1P20036 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.89■□□□□ 0.78
HLA-DPA1P20036 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DPA1P20036 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HLA-DPA1P20036 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 TFP1-202ENST00000475455 1573 ntBASIC19.89■□□□□ 0.77
HLA-DPA1P20036 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 AC125437.2-201ENST00000625180 2167 ntBASIC19.89■□□□□ 0.77
HLA-DPA1P20036 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HLA-DPA1P20036 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.88■□□□□ 0.77
HLA-DPA1P20036 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.87■□□□□ 0.77
HLA-DPA1P20036 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms