Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.06■□□□□ 0.8
SRFP11831 AL353719.1-201ENST00000566847 864 ntBASIC20.06■□□□□ 0.8
SRFP11831 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRFP11831 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.06■□□□□ 0.8
SRFP11831 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.06■□□□□ 0.8
SRFP11831 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.06■□□□□ 0.8
SRFP11831 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRFP11831 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SRFP11831 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SRFP11831 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.05■□□□□ 0.8
SRFP11831 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
SRFP11831 AC140113.3-201ENST00000605663 199 ntBASIC20.05■□□□□ 0.8
SRFP11831 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.05■□□□□ 0.8
SRFP11831 PHGDH-210ENST00000641115 1638 ntBASIC20.05■□□□□ 0.8
SRFP11831 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.05■□□□□ 0.8
SRFP11831 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SRFP11831 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.04■□□□□ 0.8
SRFP11831 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SRFP11831 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFP11831 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 HCG4P8-203ENST00000443049 980 ntBASIC20.04■□□□□ 0.8
SRFP11831 AL359075.1-203ENST00000462729 1002 ntBASIC20.04■□□□□ 0.8
SRFP11831 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SRFP11831 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
SRFP11831 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SRFP11831 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SRFP11831 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SRFP11831 AC005332.1-201ENST00000577698 1310 ntBASIC20.03■□□□□ 0.8
SRFP11831 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SRFP11831 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.03■□□□□ 0.8
SRFP11831 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 Z85996.1-201ENST00000494644 937 ntBASIC20.03■□□□□ 0.8
SRFP11831 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SRFP11831 AC116407.4-201ENST00000623319 1061 ntBASIC20.03■□□□□ 0.8
SRFP11831 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.03■□□□□ 0.8
SRFP11831 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SRFP11831 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SRFP11831 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SRFP11831 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SRFP11831 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFP11831 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFP11831 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 CA15P1-201ENST00000481698 905 ntBASIC20.02■□□□□ 0.8
SRFP11831 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.02■□□□□ 0.8
SRFP11831 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 AC008622.2-201ENST00000617006 1229 ntBASIC20.02■□□□□ 0.8
SRFP11831 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.02■□□□□ 0.8
SRFP11831 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.02■□□□□ 0.8
SRFP11831 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SRFP11831 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
SRFP11831 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.02■□□□□ 0.79
SRFP11831 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SRFP11831 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.02■□□□□ 0.79
SRFP11831 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SRFP11831 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRFP11831 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SRFP11831 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SRFP11831 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SRFP11831 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.01■□□□□ 0.79
SRFP11831 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.01■□□□□ 0.79
SRFP11831 AL441883.1-201ENST00000566170 1045 ntBASIC20.01■□□□□ 0.79
SRFP11831 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SRFP11831 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.01■□□□□ 0.79
SRFP11831 AC069148.1-201ENST00000608741 768 ntBASIC20.01■□□□□ 0.79
SRFP11831 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
SRFP11831 AL023973.1-201ENST00000624619 620 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms