Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.02■□□□□ 0.64
CCNYL3P0C7X3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.02■□□□□ 0.64
CCNYL3P0C7X3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCNYL3P0C7X3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCNYL3P0C7X3 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 FP700111.2-201ENST00000619190 1892 ntBASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 AL121829.2-201ENST00000620908 328 ntBASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 AL049637.2-201ENST00000641778 930 ntBASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCNYL3P0C7X3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 MAX-217ENST00000557277 728 ntTSL 3 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 RARRES2P10-201ENST00000564312 460 ntBASIC19■□□□□ 0.63
CCNYL3P0C7X3 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCNYL3P0C7X3 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCNYL3P0C7X3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 MIR4785-201ENST00000585005 73 ntBASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCNYL3P0C7X3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 HLA-G-202ENST00000376815 851 ntBASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 HLA-G-203ENST00000376818 1127 ntBASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TSPY7P-201ENST00000431358 1114 ntBASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCNYL3P0C7X3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.97■□□□□ 0.63
CCNYL3P0C7X3 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms