Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.56■□□□□ 0.56
MT-ND1P03886 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.56■□□□□ 0.56
MT-ND1P03886 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND1P03886 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.56■□□□□ 0.56
MT-ND1P03886 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND1P03886 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MT-ND1P03886 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND1P03886 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MT-ND1P03886 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.55■□□□□ 0.56
MT-ND1P03886 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MT-ND1P03886 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
MT-ND1P03886 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.55■□□□□ 0.56
MT-ND1P03886 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.55■□□□□ 0.56
MT-ND1P03886 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.55■□□□□ 0.56
MT-ND1P03886 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
MT-ND1P03886 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.55■□□□□ 0.56
MT-ND1P03886 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.55■□□□□ 0.56
MT-ND1P03886 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MT-ND1P03886 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MT-ND1P03886 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
MT-ND1P03886 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.54■□□□□ 0.56
MT-ND1P03886 AC019069.1-201ENST00000610008 1333 ntBASIC18.54■□□□□ 0.56
MT-ND1P03886 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MT-ND1P03886 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MT-ND1P03886 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.54■□□□□ 0.56
MT-ND1P03886 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.53■□□□□ 0.56
MT-ND1P03886 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND1P03886 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 LINC01465-201ENST00000408887 1940 ntBASIC18.53■□□□□ 0.56
MT-ND1P03886 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
MT-ND1P03886 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.53■□□□□ 0.56
MT-ND1P03886 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MT-ND1P03886 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.53■□□□□ 0.56
MT-ND1P03886 AC009237.14-201ENST00000609975 1594 ntBASIC18.53■□□□□ 0.56
MT-ND1P03886 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
MT-ND1P03886 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.52■□□□□ 0.56
MT-ND1P03886 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms