Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC21.53■■□□□ 1.04
CHRNA1P02708 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.53■■□□□ 1.04
CHRNA1P02708 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.53■■□□□ 1.04
CHRNA1P02708 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
CHRNA1P02708 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHRNA1P02708 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CHRNA1P02708 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.52■■□□□ 1.04
CHRNA1P02708 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 TSPY14P-201ENST00000303979 915 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.52■■□□□ 1.04
CHRNA1P02708 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
CHRNA1P02708 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 CRYGFP-201ENST00000418459 633 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.52■■□□□ 1.04
CHRNA1P02708 AC008040.2-201ENST00000461049 708 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 ECEL1P2-202ENST00000465689 757 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.52■■□□□ 1.04
CHRNA1P02708 EGLN1P1-201ENST00000531623 762 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 C2orf69P3-201ENST00000565542 1120 ntBASIC21.52■■□□□ 1.04
CHRNA1P02708 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
CHRNA1P02708 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC21.52■■□□□ 1.04
CHRNA1P02708 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHRNA1P02708 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.51■■□□□ 1.03
CHRNA1P02708 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 INGX-201ENST00000359239 846 ntBASIC21.51■■□□□ 1.03
CHRNA1P02708 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.51■■□□□ 1.03
CHRNA1P02708 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.51■■□□□ 1.03
CHRNA1P02708 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.51■■□□□ 1.03
CHRNA1P02708 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.51■■□□□ 1.03
CHRNA1P02708 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CHRNA1P02708 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CHRNA1P02708 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.51■■□□□ 1.03
CHRNA1P02708 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHRNA1P02708 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.5■■□□□ 1.03
CHRNA1P02708 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.5■■□□□ 1.03
CHRNA1P02708 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHRNA1P02708 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
CHRNA1P02708 RCC2P6-201ENST00000526625 1557 ntBASIC21.5■■□□□ 1.03
CHRNA1P02708 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.5■■□□□ 1.03
CHRNA1P02708 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.5■■□□□ 1.03
CHRNA1P02708 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC21.5■■□□□ 1.03
CHRNA1P02708 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHRNA1P02708 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHRNA1P02708 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHRNA1P02708 TMEM179-206ENST00000616017 1645 ntBASIC21.49■■□□□ 1.03
CHRNA1P02708 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHRNA1P02708 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CHRNA1P02708 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
CHRNA1P02708 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.49■■□□□ 1.03
CHRNA1P02708 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.49■■□□□ 1.03
CHRNA1P02708 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC21.49■■□□□ 1.03
CHRNA1P02708 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.49■■□□□ 1.03
CHRNA1P02708 AP000692.2-201ENST00000608391 879 ntBASIC21.49■■□□□ 1.03
CHRNA1P02708 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHRNA1P02708 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.48■■□□□ 1.03
CHRNA1P02708 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHRNA1P02708 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms