Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AL031598.1-201ENST00000561511 1773 ntBASIC17.02■□□□□ 0.32
HLA-DQB1P01920 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 MIR939-201ENST00000401314 82 ntBASIC17.02■□□□□ 0.32
HLA-DQB1P01920 PEMT-206ENST00000435340 960 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 AC138907.5-202ENST00000569484 235 ntBASIC17.02■□□□□ 0.32
HLA-DQB1P01920 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQB1P01920 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DQB1P01920 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 AC091305.1-201ENST00000479476 895 ntBASIC17.01■□□□□ 0.31
HLA-DQB1P01920 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
HLA-DQB1P01920 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HLA-DQB1P01920 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQB1P01920 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17■□□□□ 0.31
HLA-DQB1P01920 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQB1P01920 TPRG1LP1-201ENST00000598702 760 ntBASIC17■□□□□ 0.31
HLA-DQB1P01920 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17■□□□□ 0.31
HLA-DQB1P01920 AC120498.10-201ENST00000621827 505 ntBASIC17■□□□□ 0.31
HLA-DQB1P01920 AC093525.10-201ENST00000625130 1569 ntBASIC17■□□□□ 0.31
HLA-DQB1P01920 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17■□□□□ 0.31
HLA-DQB1P01920 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HLA-DQB1P01920 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
HLA-DQB1P01920 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms