Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TOMM40O96008 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TOMM40O96008 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC15.41■□□□□ 0.06
TOMM40O96008 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
TOMM40O96008 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TOMM40O96008 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TOMM40O96008 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 AP000974.1-201ENST00000623909 2387 ntBASIC15.4■□□□□ 0.06
TOMM40O96008 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC15.4■□□□□ 0.06
TOMM40O96008 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.4■□□□□ 0.06
TOMM40O96008 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 AL589743.5-201ENST00000616611 1050 ntBASIC15.4■□□□□ 0.06
TOMM40O96008 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
TOMM40O96008 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.4■□□□□ 0.06
TOMM40O96008 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TOMM40O96008 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.4■□□□□ 0.06
TOMM40O96008 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TOMM40O96008 TNXA-203ENST00000507684 2038 ntBASIC15.39■□□□□ 0.05
TOMM40O96008 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.39■□□□□ 0.05
TOMM40O96008 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.39■□□□□ 0.05
TOMM40O96008 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.39■□□□□ 0.05
TOMM40O96008 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC15.39■□□□□ 0.05
TOMM40O96008 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 AC007322.1-201ENST00000426983 750 ntBASIC15.39■□□□□ 0.05
TOMM40O96008 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.39■□□□□ 0.05
TOMM40O96008 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC15.39■□□□□ 0.05
TOMM40O96008 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC15.39■□□□□ 0.05
TOMM40O96008 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 OR10C1-204ENST00000622521 1039 ntBASIC15.39■□□□□ 0.05
TOMM40O96008 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.39■□□□□ 0.05
TOMM40O96008 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.39■□□□□ 0.05
TOMM40O96008 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.39■□□□□ 0.05
TOMM40O96008 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TOMM40O96008 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.39■□□□□ 0.05
TOMM40O96008 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TOMM40O96008 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.38■□□□□ 0.05
TOMM40O96008 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.38■□□□□ 0.05
TOMM40O96008 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.38■□□□□ 0.05
TOMM40O96008 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.38■□□□□ 0.05
TOMM40O96008 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.38■□□□□ 0.05
TOMM40O96008 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.38■□□□□ 0.05
TOMM40O96008 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
TOMM40O96008 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TOMM40O96008 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TOMM40O96008 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TOMM40O96008 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms