Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM3O75382 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM3O75382 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM3O75382 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.35■□□□□ 0.53
TRIM3O75382 AC073648.6-201ENST00000641589 218 ntBASIC18.35■□□□□ 0.53
TRIM3O75382 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM3O75382 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM3O75382 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM3O75382 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM3O75382 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.34■□□□□ 0.53
TRIM3O75382 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM3O75382 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM3O75382 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TRIM3O75382 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM3O75382 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.34■□□□□ 0.53
TRIM3O75382 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 AC008687.6-201ENST00000596318 630 ntBASIC18.34■□□□□ 0.53
TRIM3O75382 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TRIM3O75382 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRIM3O75382 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
TRIM3O75382 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
TRIM3O75382 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
TRIM3O75382 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
TRIM3O75382 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRIM3O75382 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRIM3O75382 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM3O75382 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.33■□□□□ 0.52
TRIM3O75382 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM3O75382 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM3O75382 AC006557.6-201ENST00000623071 864 ntBASIC18.33■□□□□ 0.52
TRIM3O75382 PTBP1P-201ENST00000554374 1601 ntBASIC18.33■□□□□ 0.52
TRIM3O75382 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRIM3O75382 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.33■□□□□ 0.52
TRIM3O75382 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRIM3O75382 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
TRIM3O75382 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 KRT17P3-201ENST00000420566 1262 ntBASIC18.32■□□□□ 0.52
TRIM3O75382 POM121L13P-201ENST00000422362 380 ntBASIC18.32■□□□□ 0.52
TRIM3O75382 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.32■□□□□ 0.52
TRIM3O75382 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.32■□□□□ 0.52
TRIM3O75382 AC120498.8-201ENST00000614275 531 ntBASIC18.32■□□□□ 0.52
TRIM3O75382 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.32■□□□□ 0.52
TRIM3O75382 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRIM3O75382 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.32■□□□□ 0.52
TRIM3O75382 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRIM3O75382 SMG8-203ENST00000578922 2178 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms