Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.91■□□□□ 0.62
CPNE3O75131 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CPNE3O75131 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE3O75131 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CPNE3O75131 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CPNE3O75131 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE3O75131 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE3O75131 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.9■□□□□ 0.62
CPNE3O75131 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.9■□□□□ 0.62
CPNE3O75131 AC004264.1-201ENST00000608354 794 ntBASIC18.9■□□□□ 0.62
CPNE3O75131 AC113410.3-201ENST00000623366 203 ntBASIC18.9■□□□□ 0.62
CPNE3O75131 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CPNE3O75131 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CPNE3O75131 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CPNE3O75131 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.89■□□□□ 0.62
CPNE3O75131 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.89■□□□□ 0.62
CPNE3O75131 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE3O75131 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CPNE3O75131 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.89■□□□□ 0.62
CPNE3O75131 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE3O75131 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CPNE3O75131 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE3O75131 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.89■□□□□ 0.61
CPNE3O75131 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CPNE3O75131 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE3O75131 AL353807.1-201ENST00000427475 662 ntBASIC18.89■□□□□ 0.61
CPNE3O75131 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.89■□□□□ 0.61
CPNE3O75131 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
CPNE3O75131 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CPNE3O75131 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.89■□□□□ 0.61
CPNE3O75131 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.89■□□□□ 0.61
CPNE3O75131 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.89■□□□□ 0.61
CPNE3O75131 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.89■□□□□ 0.61
CPNE3O75131 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 KRT8P17-201ENST00000453110 1448 ntBASIC18.89■□□□□ 0.61
CPNE3O75131 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPNE3O75131 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE3O75131 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE3O75131 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CPNE3O75131 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CPNE3O75131 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.88■□□□□ 0.61
CPNE3O75131 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE3O75131 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE3O75131 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.88■□□□□ 0.61
CPNE3O75131 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE3O75131 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CPNE3O75131 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPNE3O75131 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPNE3O75131 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.88■□□□□ 0.61
CPNE3O75131 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CPNE3O75131 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CPNE3O75131 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPNE3O75131 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CPNE3O75131 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
CPNE3O75131 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPNE3O75131 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.87■□□□□ 0.61
CPNE3O75131 HTR7P1-201ENST00000538670 1336 ntBASIC18.87■□□□□ 0.61
CPNE3O75131 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms