Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.37■■□□□ 1.65
PTCD1O75127 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC25.37■■□□□ 1.65
PTCD1O75127 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC25.37■■□□□ 1.65
PTCD1O75127 AC008040.2-201ENST00000461049 708 ntBASIC25.37■■□□□ 1.65
PTCD1O75127 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC25.37■■□□□ 1.65
PTCD1O75127 AC130371.2-201ENST00000619443 611 ntBASIC25.37■■□□□ 1.65
PTCD1O75127 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD1O75127 PHGDH-210ENST00000641115 1638 ntBASIC25.37■■□□□ 1.65
PTCD1O75127 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
PTCD1O75127 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
PTCD1O75127 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
PTCD1O75127 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCD1O75127 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 FAM87A-204ENST00000613235 858 ntBASIC25.36■■□□□ 1.65
PTCD1O75127 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCD1O75127 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC25.36■■□□□ 1.65
PTCD1O75127 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC25.36■■□□□ 1.65
PTCD1O75127 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PTCD1O75127 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.35■■□□□ 1.65
PTCD1O75127 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.35■■□□□ 1.65
PTCD1O75127 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC25.35■■□□□ 1.65
PTCD1O75127 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
PTCD1O75127 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
PTCD1O75127 RCC2P6-201ENST00000526625 1557 ntBASIC25.35■■□□□ 1.65
PTCD1O75127 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD1O75127 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.34■■□□□ 1.65
PTCD1O75127 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD1O75127 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD1O75127 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.34■■□□□ 1.65
PTCD1O75127 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC25.34■■□□□ 1.65
PTCD1O75127 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC25.34■■□□□ 1.65
PTCD1O75127 HLA-A-209ENST00000638375 975 ntBASIC25.34■■□□□ 1.65
PTCD1O75127 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
PTCD1O75127 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.34■■□□□ 1.65
PTCD1O75127 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC25.33■■□□□ 1.65
PTCD1O75127 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC25.33■■□□□ 1.65
PTCD1O75127 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
PTCD1O75127 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.33■■□□□ 1.65
PTCD1O75127 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.33■■□□□ 1.65
PTCD1O75127 AC011298.2-201ENST00000617989 482 ntBASIC25.33■■□□□ 1.65
PTCD1O75127 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC25.33■■□□□ 1.65
PTCD1O75127 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
PTCD1O75127 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC25.33■■□□□ 1.64
PTCD1O75127 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.64
PTCD1O75127 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC25.32■■□□□ 1.64
PTCD1O75127 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.32■■□□□ 1.64
PTCD1O75127 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD1O75127 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PTCD1O75127 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.32■■□□□ 1.64
PTCD1O75127 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
PTCD1O75127 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD1O75127 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD1O75127 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD1O75127 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
PTCD1O75127 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms