Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PCDHGA12O60330 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
PCDHGA12O60330 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA12O60330 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 ARMC10P1-201ENST00000313754 855 ntBASIC19.55■□□□□ 0.72
PCDHGA12O60330 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.55■□□□□ 0.72
PCDHGA12O60330 AP000525.1-201ENST00000608286 694 ntBASIC19.55■□□□□ 0.72
PCDHGA12O60330 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.55■□□□□ 0.72
PCDHGA12O60330 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.55■□□□□ 0.72
PCDHGA12O60330 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PCDHGA12O60330 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
PCDHGA12O60330 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PCDHGA12O60330 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 KRT8P9-201ENST00000558927 1449 ntBASIC19.53■□□□□ 0.72
PCDHGA12O60330 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 HLA-G-202ENST00000376815 851 ntBASIC19.53■□□□□ 0.72
PCDHGA12O60330 HLA-G-203ENST00000376818 1127 ntBASIC19.53■□□□□ 0.72
PCDHGA12O60330 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 KSR1P1-201ENST00000446298 240 ntBASIC19.53■□□□□ 0.72
PCDHGA12O60330 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 AC116562.2-201ENST00000507042 360 ntBASIC19.53■□□□□ 0.72
PCDHGA12O60330 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PCDHGA12O60330 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PCDHGA12O60330 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 AC005521.1-201ENST00000393351 872 ntBASIC19.52■□□□□ 0.72
PCDHGA12O60330 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 MIR1238-201ENST00000408483 83 ntBASIC19.52■□□□□ 0.72
PCDHGA12O60330 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 AC113347.1-201ENST00000413321 391 ntBASIC19.52■□□□□ 0.72
PCDHGA12O60330 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PCDHGA12O60330 LINC01568-207ENST00000641790 1380 ntBASIC19.52■□□□□ 0.72
PCDHGA12O60330 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PCDHGA12O60330 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA12O60330 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA12O60330 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA12O60330 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.52■□□□□ 0.71
PCDHGA12O60330 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PCDHGA12O60330 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA12O60330 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PCDHGA12O60330 FEM1AP1-201ENST00000431297 1995 ntBASIC19.52■□□□□ 0.71
PCDHGA12O60330 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 NIFKP9-201ENST00000419265 221 ntBASIC19.51■□□□□ 0.71
PCDHGA12O60330 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 FITM1-202ENST00000559294 800 ntBASIC19.51■□□□□ 0.71
PCDHGA12O60330 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.51■□□□□ 0.71
PCDHGA12O60330 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PCDHGA12O60330 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms