Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.14■□□□□ 0.65
UBFD1O14562 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.14■□□□□ 0.65
UBFD1O14562 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBFD1O14562 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.13■□□□□ 0.65
UBFD1O14562 AC022517.1-201ENST00000592429 346 ntBASIC19.13■□□□□ 0.65
UBFD1O14562 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.13■□□□□ 0.65
UBFD1O14562 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.13■□□□□ 0.65
UBFD1O14562 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.13■□□□□ 0.65
UBFD1O14562 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.13■□□□□ 0.65
UBFD1O14562 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.13■□□□□ 0.65
UBFD1O14562 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
UBFD1O14562 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBFD1O14562 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.13■□□□□ 0.65
UBFD1O14562 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBFD1O14562 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
UBFD1O14562 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 AC093503.3-201ENST00000624917 2352 ntBASIC19.12■□□□□ 0.65
UBFD1O14562 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBFD1O14562 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.12■□□□□ 0.65
UBFD1O14562 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.12■□□□□ 0.65
UBFD1O14562 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
UBFD1O14562 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.12■□□□□ 0.65
UBFD1O14562 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.12■□□□□ 0.65
UBFD1O14562 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
UBFD1O14562 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.12■□□□□ 0.65
UBFD1O14562 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBFD1O14562 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.12■□□□□ 0.65
UBFD1O14562 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
UBFD1O14562 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.11■□□□□ 0.65
UBFD1O14562 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
UBFD1O14562 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBFD1O14562 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 GPX1P1-201ENST00000388829 606 ntBASIC19.11■□□□□ 0.65
UBFD1O14562 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.11■□□□□ 0.65
UBFD1O14562 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.11■□□□□ 0.65
UBFD1O14562 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBFD1O14562 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 AC018553.1-201ENST00000616682 1458 ntBASIC19.1■□□□□ 0.65
UBFD1O14562 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.1■□□□□ 0.65
UBFD1O14562 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
UBFD1O14562 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.1■□□□□ 0.65
UBFD1O14562 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms