Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
YJEFN3A6XGL0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.6■□□□□ 0.89
YJEFN3A6XGL0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 AC066615.1-201ENST00000640911 628 ntBASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.59■□□□□ 0.89
YJEFN3A6XGL0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 TMEM179-206ENST00000616017 1645 ntBASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 YBX1P10-201ENST00000444752 975 ntBASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 KRT16P5-201ENST00000455284 522 ntBASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
YJEFN3A6XGL0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
YJEFN3A6XGL0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
YJEFN3A6XGL0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms