Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 AC116351.2-201ENST00000606540 1585 ntBASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC162PA2VCL2 TREX1-205ENST00000625293 1783 ntBASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 RPS2P52-201ENST00000469610 820 ntBASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC162PA2VCL2 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.71■□□□□ 0.75
CCDC162PA2VCL2 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 SOX15-203ENST00000570788 1093 ntBASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC162PA2VCL2 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC162PA2VCL2 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC162PA2VCL2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms