Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC016769.1-201ENST00000409132 1010 ntBASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC016405.3-201ENST00000607710 860 ntBASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF103-CHMP3A0A140T963 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 MFSD11-216ENST00000590393 1141 ntBASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF103-CHMP3A0A140T963 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 AL162412.1-201ENST00000567129 965 ntBASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF103-CHMP3A0A140T963 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF103-CHMP3A0A140T963 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 RARRES2P6-201ENST00000567333 442 ntBASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF103-CHMP3A0A140T963 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms