Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 AL136116.3-201ENST00000402907 1138 ntBASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 PTPA-214ENST00000423100 988 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 AL136162.1-201ENST00000607711 1078 ntBASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TRAV34A0A0B4J273 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 KRT8P36-201ENST00000489121 1440 ntBASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.21■□□□□ 0.03
TRAV34A0A0B4J273 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 FER1L4-210ENST00000615531 5998 ntBASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.21■□□□□ 0.02
TRAV34A0A0B4J273 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 MPST-208ENST00000628507 698 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV34A0A0B4J273 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 KRT16P2-201ENST00000414673 1423 ntBASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 MOK-225ENST00000522867 1883 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV34A0A0B4J273 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms