Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
SMARCA2P51531 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC10.27□□□□□ -0.77
SMARCA2P51531 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SMARCA2P51531 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SMARCA2P51531 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
SMARCA2P51531 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
SMARCA2P51531 THAP12P9-201ENST00000503971 2360 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 RN7SL51P-201ENST00000468230 285 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 AC007686.1-201ENST00000488511 463 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC10.26□□□□□ -0.77
SMARCA2P51531 OR11J2P-201ENST00000555298 907 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 AC018552.1-201ENST00000562099 811 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 LINC01739-205ENST00000641890 573 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 LINC01616-201ENST00000561816 2280 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA2P51531 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
SMARCA2P51531 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA2P51531 RNA5SP305-201ENST00000362665 119 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 SSX3-202ENST00000376893 800 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA2P51531 AC023141.8-201ENST00000442554 208 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 AL389915.2-201ENST00000454576 441 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 RPS29P22-201ENST00000472363 168 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 CCDC11P1-201ENST00000503137 1162 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC10.26□□□□□ -0.77
SMARCA2P51531 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC10.26□□□□□ -0.77
SMARCA2P51531 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC10.26□□□□□ -0.77
SMARCA2P51531 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC10.26□□□□□ -0.77
SMARCA2P51531 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 CDY5P-201ENST00000411487 1580 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 CDY9P-201ENST00000451397 1580 ntBASIC10.26□□□□□ -0.77
SMARCA2P51531 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
SMARCA2P51531 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC10.25□□□□□ -0.77
SMARCA2P51531 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 ZCCHC2-204ENST00000586834 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
SMARCA2P51531 MIR133B-201ENST00000362210 119 ntBASIC10.25□□□□□ -0.77
SMARCA2P51531 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
SMARCA2P51531 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC10.25□□□□□ -0.77
SMARCA2P51531 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SMARCA2P51531 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
SMARCA2P51531 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 AC024589.2-201ENST00000605642 1294 ntBASIC10.25□□□□□ -0.77
SMARCA2P51531 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC10.25□□□□□ -0.77
SMARCA2P51531 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
SMARCA2P51531 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC10.25□□□□□ -0.77
SMARCA2P51531 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SMARCA2P51531 SCN9A-203ENST00000409672 9768 ntAPPRIS P2 TSL 5 BASIC10.24□□□□□ -0.77
SMARCA2P51531 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 HSPA8P18-201ENST00000439846 1928 ntBASIC10.24□□□□□ -0.77
SMARCA2P51531 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
SMARCA2P51531 MIR130A-201ENST00000385274 89 ntBASIC10.24□□□□□ -0.77
SMARCA2P51531 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC10.24□□□□□ -0.77
SMARCA2P51531 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC10.24□□□□□ -0.77
SMARCA2P51531 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC10.24□□□□□ -0.77
SMARCA2P51531 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC10.24□□□□□ -0.77
SMARCA2P51531 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC10.24□□□□□ -0.77
SMARCA2P51531 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC10.24□□□□□ -0.77
SMARCA2P51531 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC10.24□□□□□ -0.77
SMARCA2P51531 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC10.24□□□□□ -0.77
SMARCA2P51531 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
SMARCA2P51531 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
SMARCA2P51531 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms