RNA–Protein interactions for RNA: ENST00000614853.1

LINC01197-205, Transcript of long intergenic non-protein coding RNA 1197, humanhuman

TSL 3 BASIC

Gene LINC01197, Length 1,774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01197-205ENST00000614853 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
LINC01197-205ENST00000614853 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
LINC01197-205ENST00000614853 SENP3Q9H4L4 574 aaPredicted RBP16.14■□□□□ 0.17
LINC01197-205ENST00000614853 POTEDQ86YR6 584 aa16.09■□□□□ 0.17
LINC01197-205ENST00000614853 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
LINC01197-205ENST00000614853 SLC24A1O60721 1099 aa15.12■□□□□ 0.01
LINC01197-205ENST00000614853 FOXD1Q16676 465 aa15.05■□□□□ -0
LINC01197-205ENST00000614853 MSH5O43196 834 aa14.68□□□□□ -0.06
LINC01197-205ENST00000614853 DAXXQ9UER7 740 aaPredicted RBP13.89□□□□□ -0.19
LINC01197-205ENST00000614853 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
LINC01197-205ENST00000614853 MYT1Q01538 1121 aa13.78□□□□□ -0.2
LINC01197-205ENST00000614853 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
LINC01197-205ENST00000614853 TTBK1Q5TCY1 1321 aaPredicted RBP13.73□□□□□ -0.21
LINC01197-205ENST00000614853 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
LINC01197-205ENST00000614853 PRKCSHP14314 528 aaPredicted RBP13.56□□□□□ -0.24
LINC01197-205ENST00000614853 APLP2Q06481 763 aa13.56□□□□□ -0.24
LINC01197-205ENST00000614853 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
LINC01197-205ENST00000614853 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
LINC01197-205ENST00000614853 ADRA2BP18089 450 aa13.48□□□□□ -0.25
LINC01197-205ENST00000614853 NCBP3Q53F19 620 aaKnown RBP13.47□□□□□ -0.25
LINC01197-205ENST00000614853 NISCHQ9Y2I1 1504 aa13.43□□□□□ -0.26
LINC01197-205ENST00000614853 RTN4Q9NQC3 1192 aaKnown RBP13.39□□□□□ -0.27
LINC01197-205ENST00000614853 ERICH6Q7L0X2 663 aa13.35□□□□□ -0.27
LINC01197-205ENST00000614853 CACNB1Q02641 598 aaPredicted RBP13.22□□□□□ -0.29
LINC01197-205ENST00000614853 AMER1Q5JTC6 1135 aaPredicted RBP12.99□□□□□ -0.33
LINC01197-205ENST00000614853 ARXQ96QS3 562 aa12.98□□□□□ -0.33
LINC01197-205ENST00000614853 TIMELESSQ9UNS1 1208 aa12.85□□□□□ -0.35
LINC01197-205ENST00000614853 KCNA4P22459 653 aa12.79□□□□□ -0.36
LINC01197-205ENST00000614853 EIF5BO60841 1220 aaKnown RBP12.68□□□□□ -0.38
LINC01197-205ENST00000614853 RANGAP1P46060 587 aaPredicted RBP12.65□□□□□ -0.38
LINC01197-205ENST00000614853 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
LINC01197-205ENST00000614853 TULP1O00294 542 aaPredicted RBP12.59□□□□□ -0.39
LINC01197-205ENST00000614853 DMRT2Q9Y5R5 561 aa12.59□□□□□ -0.39
LINC01197-205ENST00000614853 KLHL34Q8N239 644 aa12.57□□□□□ -0.4
LINC01197-205ENST00000614853 MAPK8IP2Q13387 824 aaPredicted RBP12.56□□□□□ -0.4
LINC01197-205ENST00000614853 HOMEZQ8IX15 550 aa12.53□□□□□ -0.4
LINC01197-205ENST00000614853 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
LINC01197-205ENST00000614853 POTEHQ6S545 545 aa12.42□□□□□ -0.42
LINC01197-205ENST00000614853 PODXL2Q9NZ53 605 aa12.35□□□□□ -0.43
LINC01197-205ENST00000614853 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
LINC01197-205ENST00000614853 PLEKHG5O94827 1062 aa12.33□□□□□ -0.44
LINC01197-205ENST00000614853 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
LINC01197-205ENST00000614853 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
LINC01197-205ENST00000614853 BCANQ96GW7 911 aa12.25□□□□□ -0.45
LINC01197-205ENST00000614853 BCL11AQ9H165 835 aa12.21□□□□□ -0.45
LINC01197-205ENST00000614853 C1QBPQ07021 282 aaKnown RBP12.18□□□□□ -0.46
LINC01197-205ENST00000614853 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
LINC01197-205ENST00000614853 PPP4R3CPQ6ZMV5 832 aa12.13□□□□□ -0.47
LINC01197-205ENST00000614853 DCAF8L1A6NGE4 600 aa12.13□□□□□ -0.47
LINC01197-205ENST00000614853 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
LINC01197-205ENST00000614853 PLCB2Q00722 1185 aa11.98□□□□□ -0.49
LINC01197-205ENST00000614853 FAM9AQ8IZU1 332 aaPredicted RBP11.96□□□□□ -0.49
LINC01197-205ENST00000614853 C14orf37Q86TY3 774 aa11.94□□□□□ -0.5
LINC01197-205ENST00000614853 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
LINC01197-205ENST00000614853 FBXO3Q9UK99 471 aa11.88□□□□□ -0.51
LINC01197-205ENST00000614853 TMEM132AQ24JP5 1023 aa11.87□□□□□ -0.51
LINC01197-205ENST00000614853 HAP1P54257 671 aaPredicted RBP11.84□□□□□ -0.51
LINC01197-205ENST00000614853 CCDC180Q9P1Z9 1646 aa11.84□□□□□ -0.51
LINC01197-205ENST00000614853 LOC105371045A0A1W2PR82 267 aa11.83□□□□□ -0.52
LINC01197-205ENST00000614853 TRIM26Q12899 539 aaPredicted RBP11.8□□□□□ -0.52
LINC01197-205ENST00000614853 CNKSR2Q8WXI2 1034 aa11.78□□□□□ -0.52
LINC01197-205ENST00000614853 PDIA4P13667 645 aaKnown RBP11.77□□□□□ -0.52
LINC01197-205ENST00000614853 SLC4A1APQ9BWU0 796 aaKnown RBP11.76□□□□□ -0.53
LINC01197-205ENST00000614853 UBE2Q2Q8WVN8 375 aa11.67□□□□□ -0.54
LINC01197-205ENST00000614853 HRCP23327 699 aa11.67□□□□□ -0.54
LINC01197-205ENST00000614853 NPM3O75607 178 aaKnown RBP11.65□□□□□ -0.54
LINC01197-205ENST00000614853 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
LINC01197-205ENST00000614853 RNF216Q9NWF9 866 aaPredicted RBP11.63□□□□□ -0.55
LINC01197-205ENST00000614853 SUPT5HO00267 1087 aaKnown RBP11.62□□□□□ -0.55
LINC01197-205ENST00000614853 CHMP4AQ9BY43 222 aa11.62□□□□□ -0.55
LINC01197-205ENST00000614853 UBTFP17480 764 aaKnown RBP11.59□□□□□ -0.55
LINC01197-205ENST00000614853 DCAF8L2P0C7V8 631 aa11.56□□□□□ -0.56
LINC01197-205ENST00000614853 VSIG10Q8N0Z9 540 aa11.56□□□□□ -0.56
LINC01197-205ENST00000614853 SAMD1Q6SPF0 538 aaPredicted RBP11.54□□□□□ -0.56
LINC01197-205ENST00000614853 PDE4CQ08493 712 aa11.54□□□□□ -0.56
LINC01197-205ENST00000614853 KDM2AQ9Y2K7 1162 aa11.51□□□□□ -0.57
LINC01197-205ENST00000614853 DHX37Q8IY37 1157 aaKnown RBP11.44□□□□□ -0.58
LINC01197-205ENST00000614853 BRD2P25440 801 aaKnown RBP11.42□□□□□ -0.58
LINC01197-205ENST00000614853 ZBTB22O15209 634 aa11.41□□□□□ -0.58
LINC01197-205ENST00000614853 CDK11BP21127 795 aaKnown RBP11.41□□□□□ -0.58
LINC01197-205ENST00000614853 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
LINC01197-205ENST00000614853 NEFLP07196 543 aa11.4□□□□□ -0.58
LINC01197-205ENST00000614853 TAF7LQ5H9L4 462 aa11.4□□□□□ -0.58
LINC01197-205ENST00000614853 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
LINC01197-205ENST00000614853 ABCC9O60706 1549 aa11.39□□□□□ -0.59
LINC01197-205ENST00000614853 FBLN2P98095 1184 aa11.38□□□□□ -0.59
LINC01197-205ENST00000614853 IGSF3O75054 1194 aa11.34□□□□□ -0.59
LINC01197-205ENST00000614853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC01197-205ENST00000614853 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
LINC01197-205ENST00000614853 BCL11BQ9C0K0 894 aaPredicted RBP11.27□□□□□ -0.61
LINC01197-205ENST00000614853 ZCCHC6Q5VYS8 1495 aaKnown RBP11.25□□□□□ -0.61
LINC01197-205ENST00000614853 FKBP8Q14318 412 aa11.21□□□□□ -0.61
LINC01197-205ENST00000614853 HSP90B1P14625 803 aaKnown RBP11.21□□□□□ -0.62
LINC01197-205ENST00000614853 FGD1P98174 961 aa11.2□□□□□ -0.62
LINC01197-205ENST00000614853 HMGB1P09429 215 aaKnown RBP11.15□□□□□ -0.62
LINC01197-205ENST00000614853 DSG3P32926 999 aa11.14□□□□□ -0.63
LINC01197-205ENST00000614853 SP7Q8TDD2 431 aaPredicted RBP11.13□□□□□ -0.63
LINC01197-205ENST00000614853 DCAF1Q9Y4B6 1507 aa11.12□□□□□ -0.63
LINC01197-205ENST00000614853 CENPBP07199 599 aaPredicted RBP11.1□□□□□ -0.63
LINC01197-205ENST00000614853 CFAP44Q96MT7 982 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms