Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC002310.3-201ENST00000569728 723 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AC124319.3-201ENST00000616832 526 ntBASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 BAAT-202ENST00000395051 2252 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 APOL1-205ENST00000422706 2901 ntAPPRIS ALT2 TSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ATG4A-203ENST00000372232 2315 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 KIR3DX1-205ENST00000610811 3325 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 FAM193A-204ENST00000505311 4110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 AP4S1-204ENST00000542754 4243 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 SUB1-201ENST00000265073 3507 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ARMCX5-206ENST00000604957 4640 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 DDX53-201ENST00000327968 3629 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 BRCA1-208ENST00000468300 3273 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
COL25A1Q9BXS0 C11orf57-201ENST00000280352 3693 ntAPPRIS ALT1 TSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 CA5B-204ENST00000454127 2205 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 U91328.2-201ENST00000606723 4130 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 OVCH1-201ENST00000318184 3405 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 C1QTNF3-AMACR-201ENST00000382079 3424 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC244034.3-201ENST00000624347 3135 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 ZNF185-212ENST00000539731 4334 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC130360.2-201ENST00000533477 1556 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 METAP2-202ENST00000323666 3601 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC093904.4-201ENST00000565044 3273 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 NPAP1P4-201ENST00000443325 3310 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 OR9G4-201ENST00000302957 984 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RNU1-87P-201ENST00000363727 170 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 SNORA63C-201ENST00000364578 129 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP152-201ENST00000365184 110 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RNU6-463P-201ENST00000384340 107 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RNU6-1122P-201ENST00000384449 107 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 CDC42P6-201ENST00000421246 576 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL139421.1-201ENST00000423010 169 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 SLC44A3-AS1-205ENST00000424505 612 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC092017.2-201ENST00000427600 362 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 MTND4LP10-201ENST00000435146 291 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL512286.1-201ENST00000439244 400 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RN7SL88P-201ENST00000480166 299 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 RN7SL629P-201ENST00000489622 285 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 FGF7P4-201ENST00000509595 295 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 FLJ46284-203ENST00000521230 407 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC063977.7-201ENST00000594454 337 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 EDRF1-AS1-207ENST00000610534 706 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AC139769.3-201ENST00000618383 175 ntBASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 AL590644.1-202ENST00000634972 590 ntTSL 3 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 BLOC1S6-218ENST00000568816 4013 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 CHRNA6-201ENST00000276410 2400 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 SORBS2-206ENST00000393528 3043 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
COL25A1Q9BXS0 MEIS2-203ENST00000340545 3056 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms