RNA–Protein interactions for RNA: ENST00000363727.1

RNU1-87P-201, Transcript of RNA, U1 small nuclear 87, pseudogene, humanhuman

BASIC

Gene RNU1-87P, Length 170 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-87P-201ENST00000363727 AEBP2Q6ZN18 517 aaPredicted RBP21.4■■□□□ 1.02
RNU1-87P-201ENST00000363727 CHIC1Q5VXU3 224 aa21.12■□□□□ 0.97
RNU1-87P-201ENST00000363727 PHF23Q9BUL5 403 aaPredicted RBP18.65■□□□□ 0.58
RNU1-87P-201ENST00000363727 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
RNU1-87P-201ENST00000363727 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.36
RNU1-87P-201ENST00000363727 FOXD1Q16676 465 aa16.77■□□□□ 0.28
RNU1-87P-201ENST00000363727 ADRA2BP18089 450 aa16.42■□□□□ 0.22
RNU1-87P-201ENST00000363727 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
RNU1-87P-201ENST00000363727 PIAS4Q8N2W9 510 aaPredicted RBP15.92■□□□□ 0.14
RNU1-87P-201ENST00000363727 MSH5O43196 834 aa15.31■□□□□ 0.04
RNU1-87P-201ENST00000363727 KCNA4P22459 653 aa15.29■□□□□ 0.04
RNU1-87P-201ENST00000363727 PPP4R3CPQ6ZMV5 832 aa15.29■□□□□ 0.04
RNU1-87P-201ENST00000363727 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
RNU1-87P-201ENST00000363727 SCAF1Q9H7N4 1312 aaKnown RBP14.92□□□□□ -0.02
RNU1-87P-201ENST00000363727 MAPK8IP2Q13387 824 aaPredicted RBP14.82□□□□□ -0.04
RNU1-87P-201ENST00000363727 NPM3O75607 178 aaKnown RBP14.76□□□□□ -0.05
RNU1-87P-201ENST00000363727 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
RNU1-87P-201ENST00000363727 SLC4A1APQ9BWU0 796 aaKnown RBP14.61□□□□□ -0.07
RNU1-87P-201ENST00000363727 EHMT2Q96KQ7 1210 aa14.6□□□□□ -0.07
RNU1-87P-201ENST00000363727 DMRT2Q9Y5R5 561 aa14.46□□□□□ -0.09
RNU1-87P-201ENST00000363727 RNF216Q9NWF9 866 aaPredicted RBP14.39□□□□□ -0.11
RNU1-87P-201ENST00000363727 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
RNU1-87P-201ENST00000363727 CSRNP3Q8WYN3 585 aa14.2□□□□□ -0.14
RNU1-87P-201ENST00000363727 DNAJC5BQ9UF47 199 aa14.11□□□□□ -0.15
RNU1-87P-201ENST00000363727 ZBTB22O15209 634 aa14.08□□□□□ -0.16
RNU1-87P-201ENST00000363727 DCAF8L1A6NGE4 600 aa13.96□□□□□ -0.17
RNU1-87P-201ENST00000363727 FOXD4L1Q9NU39 408 aa13.95□□□□□ -0.18
RNU1-87P-201ENST00000363727 SLC4A2P04920 1241 aa13.86□□□□□ -0.19
RNU1-87P-201ENST00000363727 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.22
RNU1-87P-201ENST00000363727 MYCNP04198 464 aaPredicted RBP13.6□□□□□ -0.23
RNU1-87P-201ENST00000363727 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
RNU1-87P-201ENST00000363727 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
RNU1-87P-201ENST00000363727 ATXN8OSP0DMR3 200 aa13.37□□□□□ -0.27
RNU1-87P-201ENST00000363727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
RNU1-87P-201ENST00000363727 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
RNU1-87P-201ENST00000363727 SAMD1Q6SPF0 538 aaPredicted RBP13.3□□□□□ -0.28
RNU1-87P-201ENST00000363727 ATF5Q9Y2D1 282 aaPredicted RBP13.29□□□□□ -0.28
RNU1-87P-201ENST00000363727 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
RNU1-87P-201ENST00000363727 APLP2Q06481 763 aa13.11□□□□□ -0.31
RNU1-87P-201ENST00000363727 SPINK5Q9NQ38 1064 aaPredicted RBP13.04□□□□□ -0.32
RNU1-87P-201ENST00000363727 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
RNU1-87P-201ENST00000363727 TRHP20396 242 aaPredicted RBP13□□□□□ -0.33
RNU1-87P-201ENST00000363727 C1QBPQ07021 282 aaKnown RBP12.99□□□□□ -0.33
RNU1-87P-201ENST00000363727 CAPN15O75808 1086 aa12.98□□□□□ -0.33
RNU1-87P-201ENST00000363727 FKBP8Q14318 412 aa12.86□□□□□ -0.35
RNU1-87P-201ENST00000363727 POLA2Q14181 598 aa12.82□□□□□ -0.36
RNU1-87P-201ENST00000363727 ABCB7O75027 752 aa12.8□□□□□ -0.36
RNU1-87P-201ENST00000363727 MKRN4PQ13434 485 aaPredicted RBP12.69□□□□□ -0.38
RNU1-87P-201ENST00000363727 CACNB1Q02641 598 aaPredicted RBP12.68□□□□□ -0.38
RNU1-87P-201ENST00000363727 FBLN2P98095 1184 aa12.67□□□□□ -0.38
RNU1-87P-201ENST00000363727 DSG3P32926 999 aa12.63□□□□□ -0.39
RNU1-87P-201ENST00000363727 SPDYE4A6NLX3 237 aa12.55□□□□□ -0.4
RNU1-87P-201ENST00000363727 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
RNU1-87P-201ENST00000363727 OSCARQ8IYS5 282 aa12.39□□□□□ -0.43
RNU1-87P-201ENST00000363727 PROM2Q8N271 834 aa12.3□□□□□ -0.44
RNU1-87P-201ENST00000363727 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
RNU1-87P-201ENST00000363727 FBXO3Q9UK99 471 aa12.25□□□□□ -0.45
RNU1-87P-201ENST00000363727 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
RNU1-87P-201ENST00000363727 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
RNU1-87P-201ENST00000363727 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
RNU1-87P-201ENST00000363727 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
RNU1-87P-201ENST00000363727 SSUH2Q9Y2M2 353 aa12.18□□□□□ -0.46
RNU1-87P-201ENST00000363727 AMER1Q5JTC6 1135 aaPredicted RBP12.16□□□□□ -0.46
RNU1-87P-201ENST00000363727 PABPN1Q86U42 306 aaKnown RBP eCLIP12.16□□□□□ -0.46
RNU1-87P-201ENST00000363727 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
RNU1-87P-201ENST00000363727 RBM42Q9BTD8 480 aaKnown RBP11.99□□□□□ -0.49
RNU1-87P-201ENST00000363727 IFNLR1Q8IU57 520 aaPredicted RBP11.98□□□□□ -0.49
RNU1-87P-201ENST00000363727 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
RNU1-87P-201ENST00000363727 PLCD3Q8N3E9 789 aa11.92□□□□□ -0.5
RNU1-87P-201ENST00000363727 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
RNU1-87P-201ENST00000363727 MIER1Q8N108 512 aa11.9□□□□□ -0.5
RNU1-87P-201ENST00000363727 KLHL34Q8N239 644 aa11.9□□□□□ -0.5
RNU1-87P-201ENST00000363727 CLEC11AQ9Y240 323 aa11.86□□□□□ -0.51
RNU1-87P-201ENST00000363727 REM2Q8IYK8 340 aaPredicted RBP11.84□□□□□ -0.51
RNU1-87P-201ENST00000363727 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
RNU1-87P-201ENST00000363727 SPOCK2Q92563 424 aa11.78□□□□□ -0.52
RNU1-87P-201ENST00000363727 PLEKHG5O94827 1062 aa11.77□□□□□ -0.53
RNU1-87P-201ENST00000363727 PRR29P0C7W0 189 aa11.74□□□□□ -0.53
RNU1-87P-201ENST00000363727 PITPNM1O00562 1244 aa11.72□□□□□ -0.53
RNU1-87P-201ENST00000363727 PKD2Q13563 968 aa11.68□□□□□ -0.54
RNU1-87P-201ENST00000363727 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
RNU1-87P-201ENST00000363727 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
RNU1-87P-201ENST00000363727 CREBZFQ9NS37 354 aa11.64□□□□□ -0.55
RNU1-87P-201ENST00000363727 CIZ1Q9ULV3 898 aaPredicted RBP11.62□□□□□ -0.55
RNU1-87P-201ENST00000363727 ECM2O94769 699 aaPredicted RBP11.6□□□□□ -0.55
RNU1-87P-201ENST00000363727 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
RNU1-87P-201ENST00000363727 MNX1P50219 401 aaPredicted RBP11.53□□□□□ -0.56
RNU1-87P-201ENST00000363727 NUBP1P53384 320 aa11.52□□□□□ -0.57
RNU1-87P-201ENST00000363727 DCAF8Q5TAQ9 597 aa11.49□□□□□ -0.57
RNU1-87P-201ENST00000363727 RGL2O15211 777 aa11.47□□□□□ -0.57
RNU1-87P-201ENST00000363727 SLC24A1O60721 1099 aa11.45□□□□□ -0.58
RNU1-87P-201ENST00000363727 GSE1Q14687 1217 aa11.45□□□□□ -0.58
RNU1-87P-201ENST00000363727 NPM1P06748 294 aaKnown RBP eCLIP11.44□□□□□ -0.58
RNU1-87P-201ENST00000363727 PRKAR2AP13861 404 aaKnown RBP11.44□□□□□ -0.58
RNU1-87P-201ENST00000363727 RASEFQ8IZ41 740 aa11.44□□□□□ -0.58
RNU1-87P-201ENST00000363727 CHRDL2Q6WN34 429 aa11.43□□□□□ -0.58
RNU1-87P-201ENST00000363727 FAM212AQ96EL1 285 aa11.43□□□□□ -0.58
RNU1-87P-201ENST00000363727 FARP1Q9Y4F1 1045 aaPredicted RBP11.4□□□□□ -0.58
RNU1-87P-201ENST00000363727 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
RNU1-87P-201ENST00000363727 TRIM41Q8WV44 630 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms