Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
LINC00346Q8IVM7 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.6□□□□□ -1.51
LINC00346Q8IVM7 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.6□□□□□ -1.51
LINC00346Q8IVM7 KARSP1-201ENST00000451871 1752 ntBASIC5.6□□□□□ -1.51
LINC00346Q8IVM7 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
LINC00346Q8IVM7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RN7SKP237-201ENST00000364663 301 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 YWHAZP4-201ENST00000392459 708 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 CCNB2P1-201ENST00000399411 1150 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 GSTA12P-201ENST00000402398 508 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 TMA16P2-201ENST00000413187 601 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 MTCYBP29-201ENST00000436327 1006 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL627224.1-201ENST00000448334 444 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 NPM1P9-201ENST00000453156 844 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC103563.5-201ENST00000455643 364 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 VPS25P1-201ENST00000455691 508 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RN7SL221P-201ENST00000466190 281 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RN7SL267P-201ENST00000485107 261 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC018645.1-201ENST00000505003 109 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RNU6-889P-201ENST00000517189 103 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC131935.1-201ENST00000524621 333 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL133399.1-201ENST00000527476 298 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 BCAS2P1-201ENST00000528022 632 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RPL3P13-201ENST00000550415 216 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 OR4H6P-201ENST00000563771 921 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC027796.1-201ENST00000575593 512 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 RN7SL475P-201ENST00000583379 298 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC036176.3-201ENST00000602456 418 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AL390877.1-201ENST00000605704 214 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AP003499.2-201ENST00000624100 483 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC135068.11-201ENST00000636378 921 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 AC110373.1-201ENST00000505994 3505 ntBASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.59□□□□□ -1.51
LINC00346Q8IVM7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 AL121950.1-201ENST00000624993 2077 ntBASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
LINC00346Q8IVM7 AC017002.4-201ENST00000604721 1525 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AC125238.2-201ENST00000430003 1440 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AC107977.1-201ENST00000355745 939 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 LCN1P2-201ENST00000372030 223 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 HMGB3P7-201ENST00000400214 611 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AL033519.1-201ENST00000407266 307 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 RPL31P11-202ENST00000454082 372 ntBASIC5.58□□□□□ -1.52
LINC00346Q8IVM7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms