RNA–Protein interactions for RNA: ENST00000379494.3

SMPX-201, Transcript of small muscle protein X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPX, Length 938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPX-201ENST00000379494 AEBP2Q6ZN18 517 aaPredicted RBP28.72■■■□□ 2.19
SMPX-201ENST00000379494 CHIC1Q5VXU3 224 aa26.87■■□□□ 1.89
SMPX-201ENST00000379494 SENP3Q9H4L4 574 aaPredicted RBP24.6■■□□□ 1.53
SMPX-201ENST00000379494 PHF23Q9BUL5 403 aaPredicted RBP24.17■■□□□ 1.46
SMPX-201ENST00000379494 FOXD1Q16676 465 aa23.04■■□□□ 1.28
SMPX-201ENST00000379494 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
SMPX-201ENST00000379494 MSH5O43196 834 aa21.86■■□□□ 1.09
SMPX-201ENST00000379494 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
SMPX-201ENST00000379494 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
SMPX-201ENST00000379494 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
SMPX-201ENST00000379494 ADRA2BP18089 450 aa21■□□□□ 0.95
SMPX-201ENST00000379494 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
SMPX-201ENST00000379494 MAPK8IP2Q13387 824 aaPredicted RBP19.38■□□□□ 0.69
SMPX-201ENST00000379494 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
SMPX-201ENST00000379494 CACNB1Q02641 598 aaPredicted RBP19.25■□□□□ 0.67
SMPX-201ENST00000379494 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
SMPX-201ENST00000379494 RNF39Q9H2S5 420 aa18.6■□□□□ 0.57
SMPX-201ENST00000379494 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
SMPX-201ENST00000379494 HOXD11P31277 338 aaPredicted RBP18.52■□□□□ 0.56
SMPX-201ENST00000379494 CNKSR2Q8WXI2 1034 aa18.4■□□□□ 0.54
SMPX-201ENST00000379494 NISCHQ9Y2I1 1504 aa18.31■□□□□ 0.52
SMPX-201ENST00000379494 RNF216Q9NWF9 866 aaPredicted RBP18.3■□□□□ 0.52
SMPX-201ENST00000379494 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
SMPX-201ENST00000379494 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
SMPX-201ENST00000379494 NCBP3Q53F19 620 aaKnown RBP17.89■□□□□ 0.45
SMPX-201ENST00000379494 POTEHQ6S545 545 aa17.66■□□□□ 0.42
SMPX-201ENST00000379494 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMPX-201ENST00000379494 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
SMPX-201ENST00000379494 U3KPZ7 1027 aaPredicted RBP17.21■□□□□ 0.35
SMPX-201ENST00000379494 DSG3P32926 999 aa17.14■□□□□ 0.33
SMPX-201ENST00000379494 CAPN15O75808 1086 aa17.04■□□□□ 0.32
SMPX-201ENST00000379494 SPINK5Q9NQ38 1064 aaPredicted RBP17.04■□□□□ 0.32
SMPX-201ENST00000379494 ABCC9O60706 1549 aa17■□□□□ 0.31
SMPX-201ENST00000379494 KCNA4P22459 653 aa16.99■□□□□ 0.31
SMPX-201ENST00000379494 SLC4A2P04920 1241 aa16.88■□□□□ 0.29
SMPX-201ENST00000379494 APLP2Q06481 763 aa16.76■□□□□ 0.27
SMPX-201ENST00000379494 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
SMPX-201ENST00000379494 CCDC180Q9P1Z9 1646 aa16.69■□□□□ 0.26
SMPX-201ENST00000379494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.68■□□□□ 0.26
SMPX-201ENST00000379494 HNRNPUL2Q1KMD3 747 aaKnown RBP16.68■□□□□ 0.26
SMPX-201ENST00000379494 ZNF219Q9P2Y4 722 aaPredicted RBP16.67■□□□□ 0.26
SMPX-201ENST00000379494 ABCB7O75027 752 aa16.59■□□□□ 0.25
SMPX-201ENST00000379494 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
SMPX-201ENST00000379494 RBM42Q9BTD8 480 aaKnown RBP16.34■□□□□ 0.21
SMPX-201ENST00000379494 CHRDL2Q6WN34 429 aa16.33■□□□□ 0.2
SMPX-201ENST00000379494 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
SMPX-201ENST00000379494 POLA2Q14181 598 aa16.2■□□□□ 0.18
SMPX-201ENST00000379494 SP7Q8TDD2 431 aaPredicted RBP16.16■□□□□ 0.18
SMPX-201ENST00000379494 RB1CC1Q8TDY2 1594 aa16.04■□□□□ 0.16
SMPX-201ENST00000379494 SLC4A1APQ9BWU0 796 aaKnown RBP16■□□□□ 0.15
SMPX-201ENST00000379494 FOXD4L1Q9NU39 408 aa15.96■□□□□ 0.15
SMPX-201ENST00000379494 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
SMPX-201ENST00000379494 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
SMPX-201ENST00000379494 NACADO15069 1562 aa15.83■□□□□ 0.13
SMPX-201ENST00000379494 AKT1S1Q96B36 256 aa15.83■□□□□ 0.12
SMPX-201ENST00000379494 PIP4P2Q8N4L2 257 aa15.77■□□□□ 0.12
SMPX-201ENST00000379494 UNC13AQ9UPW8 1703 aa15.71■□□□□ 0.1
SMPX-201ENST00000379494 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
SMPX-201ENST00000379494 HAX1O00165 279 aa15.68■□□□□ 0.1
SMPX-201ENST00000379494 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
SMPX-201ENST00000379494 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
SMPX-201ENST00000379494 ZBTB22O15209 634 aa15.6■□□□□ 0.09
SMPX-201ENST00000379494 BICRAQ9NZM4 1560 aa15.58■□□□□ 0.09
SMPX-201ENST00000379494 FXR2P51116 673 aaKnown RBP eCLIP15.56■□□□□ 0.08
SMPX-201ENST00000379494 ATXN8OSP0DMR3 200 aa15.54■□□□□ 0.08
SMPX-201ENST00000379494 DCAF8L2P0C7V8 631 aa15.51■□□□□ 0.07
SMPX-201ENST00000379494 PITPNM1O00562 1244 aa15.5■□□□□ 0.07
SMPX-201ENST00000379494 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
SMPX-201ENST00000379494 EVX2Q03828 476 aa15.46■□□□□ 0.07
SMPX-201ENST00000379494 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
SMPX-201ENST00000379494 CECR2Q9BXF3 1484 aa15.38■□□□□ 0.05
SMPX-201ENST00000379494 CC2D2AQ9P2K1 1620 aa15.36■□□□□ 0.05
SMPX-201ENST00000379494 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
SMPX-201ENST00000379494 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
SMPX-201ENST00000379494 FBLN2P98095 1184 aa15.35■□□□□ 0.05
SMPX-201ENST00000379494 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
SMPX-201ENST00000379494 DNAJC5Q9H3Z4 198 aa15.27■□□□□ 0.04
SMPX-201ENST00000379494 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
SMPX-201ENST00000379494 MKRN4PQ13434 485 aaPredicted RBP15.17■□□□□ 0.02
SMPX-201ENST00000379494 LHX8Q68G74 356 aa15.15■□□□□ 0.02
SMPX-201ENST00000379494 SPDYE1Q8NFV5 336 aaPredicted RBP15.15■□□□□ 0.02
SMPX-201ENST00000379494 DCAF1Q9Y4B6 1507 aa15.14■□□□□ 0.01
SMPX-201ENST00000379494 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
SMPX-201ENST00000379494 CLEC11AQ9Y240 323 aa15.12■□□□□ 0.01
SMPX-201ENST00000379494 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
SMPX-201ENST00000379494 ZCCHC6Q5VYS8 1495 aaKnown RBP15.11■□□□□ 0.01
SMPX-201ENST00000379494 PRKAR2AP13861 404 aaKnown RBP15.1■□□□□ 0.01
SMPX-201ENST00000379494 SSUH2Q9Y2M2 353 aa15.1■□□□□ 0.01
SMPX-201ENST00000379494 C19orf67A6NJJ6 358 aa15.09■□□□□ 0.01
SMPX-201ENST00000379494 GABBR2O75899 941 aa15.06■□□□□ 0
SMPX-201ENST00000379494 CUX2O14529 1486 aa14.88□□□□□ -0.03
SMPX-201ENST00000379494 PRR29P0C7W0 189 aa14.85□□□□□ -0.03
SMPX-201ENST00000379494 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
SMPX-201ENST00000379494 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
SMPX-201ENST00000379494 POTEIP0CG38 1075 aa14.75□□□□□ -0.05
SMPX-201ENST00000379494 ERCC6Q03468 1493 aa14.74□□□□□ -0.05
SMPX-201ENST00000379494 CSRNP3Q8WYN3 585 aa14.65□□□□□ -0.06
SMPX-201ENST00000379494 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
SMPX-201ENST00000379494 NCAPD3P42695 1498 aa14.59□□□□□ -0.07
SMPX-201ENST00000379494 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms