RNA–Protein interactions for RNA: ENST00000517189.1

RNU6-889P-201, Transcript of RNA, U6 small nuclear 889, pseudogene, humanhuman

BASIC

Gene RNU6-889P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-889P-201ENST00000517189 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
RNU6-889P-201ENST00000517189 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
RNU6-889P-201ENST00000517189 PHF23Q9BUL5 403 aaPredicted RBP19.77■□□□□ 0.76
RNU6-889P-201ENST00000517189 SENP3Q9H4L4 574 aaPredicted RBP18.84■□□□□ 0.61
RNU6-889P-201ENST00000517189 PLPPR3Q6T4P5 718 aa18.47■□□□□ 0.55
RNU6-889P-201ENST00000517189 FOXD1Q16676 465 aa17.41■□□□□ 0.38
RNU6-889P-201ENST00000517189 ADRA2BP18089 450 aa17.26■□□□□ 0.35
RNU6-889P-201ENST00000517189 PPP6R1Q9UPN7 881 aa17.24■□□□□ 0.35
RNU6-889P-201ENST00000517189 KCNA4P22459 653 aa16.65■□□□□ 0.26
RNU6-889P-201ENST00000517189 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
RNU6-889P-201ENST00000517189 PPP4R3CPQ6ZMV5 832 aa16.35■□□□□ 0.21
RNU6-889P-201ENST00000517189 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
RNU6-889P-201ENST00000517189 NCBP3Q53F19 620 aaKnown RBP16.11■□□□□ 0.17
RNU6-889P-201ENST00000517189 SLC4A1APQ9BWU0 796 aaKnown RBP15.97■□□□□ 0.15
RNU6-889P-201ENST00000517189 NPM3O75607 178 aaKnown RBP15.86■□□□□ 0.13
RNU6-889P-201ENST00000517189 MSH5O43196 834 aa15.82■□□□□ 0.12
RNU6-889P-201ENST00000517189 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
RNU6-889P-201ENST00000517189 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
RNU6-889P-201ENST00000517189 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
RNU6-889P-201ENST00000517189 MAPK8IP2Q13387 824 aaPredicted RBP15.48■□□□□ 0.07
RNU6-889P-201ENST00000517189 DNAJC5BQ9UF47 199 aa15.34■□□□□ 0.05
RNU6-889P-201ENST00000517189 ZBTB22O15209 634 aa15.31■□□□□ 0.04
RNU6-889P-201ENST00000517189 RNF216Q9NWF9 866 aaPredicted RBP15.3■□□□□ 0.04
RNU6-889P-201ENST00000517189 FOXD4L1Q9NU39 408 aa15.15■□□□□ 0.02
RNU6-889P-201ENST00000517189 DMRT2Q9Y5R5 561 aa15.14■□□□□ 0.01
RNU6-889P-201ENST00000517189 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
RNU6-889P-201ENST00000517189 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
RNU6-889P-201ENST00000517189 MYCNP04198 464 aaPredicted RBP14.64□□□□□ -0.07
RNU6-889P-201ENST00000517189 ATXN8OSP0DMR3 200 aa14.6□□□□□ -0.07
RNU6-889P-201ENST00000517189 DCAF8L1A6NGE4 600 aa14.43□□□□□ -0.1
RNU6-889P-201ENST00000517189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.36□□□□□ -0.11
RNU6-889P-201ENST00000517189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.24□□□□□ -0.13
RNU6-889P-201ENST00000517189 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
RNU6-889P-201ENST00000517189 SAMD1Q6SPF0 538 aaPredicted RBP14.21□□□□□ -0.13
RNU6-889P-201ENST00000517189 FKBP8Q14318 412 aa14.2□□□□□ -0.14
RNU6-889P-201ENST00000517189 ATF5Q9Y2D1 282 aaPredicted RBP14.2□□□□□ -0.14
RNU6-889P-201ENST00000517189 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
RNU6-889P-201ENST00000517189 AMER1Q5JTC6 1135 aaPredicted RBP14.03□□□□□ -0.16
RNU6-889P-201ENST00000517189 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
RNU6-889P-201ENST00000517189 APLP2Q06481 763 aa13.95□□□□□ -0.18
RNU6-889P-201ENST00000517189 ZNF219Q9P2Y4 722 aaPredicted RBP13.92□□□□□ -0.18
RNU6-889P-201ENST00000517189 POTEDQ86YR6 584 aa13.83□□□□□ -0.2
RNU6-889P-201ENST00000517189 SLC24A1O60721 1099 aa13.64□□□□□ -0.23
RNU6-889P-201ENST00000517189 SPDYE4A6NLX3 237 aa13.61□□□□□ -0.23
RNU6-889P-201ENST00000517189 TRHP20396 242 aaPredicted RBP13.61□□□□□ -0.23
RNU6-889P-201ENST00000517189 MKRN4PQ13434 485 aaPredicted RBP13.61□□□□□ -0.23
RNU6-889P-201ENST00000517189 RNF39Q9H2S5 420 aa13.61□□□□□ -0.23
RNU6-889P-201ENST00000517189 SPINK5Q9NQ38 1064 aaPredicted RBP13.61□□□□□ -0.23
RNU6-889P-201ENST00000517189 FBLN2P98095 1184 aa13.57□□□□□ -0.24
RNU6-889P-201ENST00000517189 FBXO3Q9UK99 471 aa13.56□□□□□ -0.24
RNU6-889P-201ENST00000517189 POLA2Q14181 598 aa13.55□□□□□ -0.24
RNU6-889P-201ENST00000517189 CAPN15O75808 1086 aa13.53□□□□□ -0.24
RNU6-889P-201ENST00000517189 C1QBPQ07021 282 aaKnown RBP13.5□□□□□ -0.25
RNU6-889P-201ENST00000517189 PROM2Q8N271 834 aa13.48□□□□□ -0.25
RNU6-889P-201ENST00000517189 ZBTB12Q9Y330 459 aaPredicted RBP13.36□□□□□ -0.27
RNU6-889P-201ENST00000517189 VASPP50552 380 aaPredicted RBP13.32□□□□□ -0.28
RNU6-889P-201ENST00000517189 ABCB7O75027 752 aa13.31□□□□□ -0.28
RNU6-889P-201ENST00000517189 IFNLR1Q8IU57 520 aaPredicted RBP13.2□□□□□ -0.3
RNU6-889P-201ENST00000517189 DSG3P32926 999 aa13.17□□□□□ -0.3
RNU6-889P-201ENST00000517189 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
RNU6-889P-201ENST00000517189 SPDYE2BA6NHP3 402 aa13.06□□□□□ -0.32
RNU6-889P-201ENST00000517189 SPDYE6P0CI01 402 aa13.06□□□□□ -0.32
RNU6-889P-201ENST00000517189 SPDYE2Q495Y8 402 aa13.06□□□□□ -0.32
RNU6-889P-201ENST00000517189 STAG3Q9UJ98 1225 aa13.03□□□□□ -0.32
RNU6-889P-201ENST00000517189 OSCARQ8IYS5 282 aa13.02□□□□□ -0.33
RNU6-889P-201ENST00000517189 SSUH2Q9Y2M2 353 aa13.01□□□□□ -0.33
RNU6-889P-201ENST00000517189 PKD2Q13563 968 aa12.99□□□□□ -0.33
RNU6-889P-201ENST00000517189 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
RNU6-889P-201ENST00000517189 SPOCK2Q92563 424 aa12.95□□□□□ -0.34
RNU6-889P-201ENST00000517189 PLCB2Q00722 1185 aa12.94□□□□□ -0.34
RNU6-889P-201ENST00000517189 PABPN1Q86U42 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
RNU6-889P-201ENST00000517189 DCAF8L2P0C7V8 631 aa12.92□□□□□ -0.34
RNU6-889P-201ENST00000517189 PLCD3Q8N3E9 789 aa12.89□□□□□ -0.35
RNU6-889P-201ENST00000517189 MIER1Q8N108 512 aa12.85□□□□□ -0.35
RNU6-889P-201ENST00000517189 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
RNU6-889P-201ENST00000517189 ECM2O94769 699 aaPredicted RBP12.8□□□□□ -0.36
RNU6-889P-201ENST00000517189 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
RNU6-889P-201ENST00000517189 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
RNU6-889P-201ENST00000517189 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
RNU6-889P-201ENST00000517189 BBXQ8WY36 941 aaPredicted RBP12.69□□□□□ -0.38
RNU6-889P-201ENST00000517189 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.66□□□□□ -0.38
RNU6-889P-201ENST00000517189 RGL2O15211 777 aa12.65□□□□□ -0.38
RNU6-889P-201ENST00000517189 NPM1P06748 294 aaKnown RBP eCLIP12.64□□□□□ -0.39
RNU6-889P-201ENST00000517189 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
RNU6-889P-201ENST00000517189 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
RNU6-889P-201ENST00000517189 TRIM41Q8WV44 630 aa12.56□□□□□ -0.4
RNU6-889P-201ENST00000517189 PAXIP1Q6ZW49 1069 aaPredicted RBP12.55□□□□□ -0.4
RNU6-889P-201ENST00000517189 SPDYE1Q8NFV5 336 aaPredicted RBP12.53□□□□□ -0.4
RNU6-889P-201ENST00000517189 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
RNU6-889P-201ENST00000517189 AKT1S1Q96B36 256 aa12.52□□□□□ -0.41
RNU6-889P-201ENST00000517189 CFAP44Q96MT7 982 aa12.52□□□□□ -0.41
RNU6-889P-201ENST00000517189 GSE1Q14687 1217 aa12.49□□□□□ -0.41
RNU6-889P-201ENST00000517189 CHGAP10645 457 aaKnown RBP12.48□□□□□ -0.41
RNU6-889P-201ENST00000517189 SPRYD3Q8NCJ5 442 aa12.48□□□□□ -0.41
RNU6-889P-201ENST00000517189 NUBP1P53384 320 aa12.46□□□□□ -0.41
RNU6-889P-201ENST00000517189 BCANQ96GW7 911 aa12.46□□□□□ -0.41
RNU6-889P-201ENST00000517189 CLEC11AQ9Y240 323 aa12.43□□□□□ -0.42
RNU6-889P-201ENST00000517189 PRR29P0C7W0 189 aa12.42□□□□□ -0.42
RNU6-889P-201ENST00000517189 KDM2AQ9Y2K7 1162 aa12.42□□□□□ -0.42
RNU6-889P-201ENST00000517189 DCAF8Q5TAQ9 597 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms