RNA–Protein interactions for RNA: ENST00000392869.6

GTDC1-204, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GTDC1, Length 10,514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-204ENST00000392869 PELP1Q8IZL8 1130 aaKnown RBP10.35□□□□□ -0.75
GTDC1-204ENST00000392869 MYT1Q01538 1121 aa10.13□□□□□ -0.79
GTDC1-204ENST00000392869 CCER1Q8TC90 406 aaPredicted RBP9.82□□□□□ -0.84
GTDC1-204ENST00000392869 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
GTDC1-204ENST00000392869 DCAF8L2P0C7V8 631 aa9.66□□□□□ -0.86
GTDC1-204ENST00000392869 ERICH6Q7L0X2 663 aa9.54□□□□□ -0.88
GTDC1-204ENST00000392869 CENPBP07199 599 aaPredicted RBP9.49□□□□□ -0.89
GTDC1-204ENST00000392869 FAM9AQ8IZU1 332 aaPredicted RBP9.47□□□□□ -0.89
GTDC1-204ENST00000392869 ZEB1P37275 1124 aaPredicted RBP9.45□□□□□ -0.9
GTDC1-204ENST00000392869 APLP2Q06481 763 aa9.35□□□□□ -0.91
GTDC1-204ENST00000392869 TTBK1Q5TCY1 1321 aaPredicted RBP9.35□□□□□ -0.91
GTDC1-204ENST00000392869 NEFLP07196 543 aa9.24□□□□□ -0.93
GTDC1-204ENST00000392869 NISCHQ9Y2I1 1504 aa9.18□□□□□ -0.94
GTDC1-204ENST00000392869 SUPT5HO00267 1087 aaKnown RBP9.15□□□□□ -0.95
GTDC1-204ENST00000392869 DAXXQ9UER7 740 aaPredicted RBP9.12□□□□□ -0.95
GTDC1-204ENST00000392869 SHROOM4Q9ULL8 1493 aa8.97□□□□□ -0.97
GTDC1-204ENST00000392869 RTL5Q5HYW3 569 aaPredicted RBP8.94□□□□□ -0.98
GTDC1-204ENST00000392869 MYT1LQ9UL68 1186 aa8.89□□□□□ -0.99
GTDC1-204ENST00000392869 GLIPR1L2Q4G1C9 344 aa8.88□□□□□ -0.99
GTDC1-204ENST00000392869 CLSPNQ9HAW4 1339 aa8.88□□□□□ -0.99
GTDC1-204ENST00000392869 EHMT2Q96KQ7 1210 aa8.88□□□□□ -0.99
GTDC1-204ENST00000392869 ZNF316A6NFI3 1004 aaPredicted RBP8.83□□□□□ -1
GTDC1-204ENST00000392869 PCGF6Q9BYE7 350 aa8.75□□□□□ -1.01
GTDC1-204ENST00000392869 TRIM26Q12899 539 aaPredicted RBP8.68□□□□□ -1.02
GTDC1-204ENST00000392869 ANP32BQ92688 251 aaKnown RBP8.67□□□□□ -1.02
GTDC1-204ENST00000392869 NEFMP07197 916 aa8.67□□□□□ -1.02
GTDC1-204ENST00000392869 TRIM41Q8WV44 630 aa8.62□□□□□ -1.03
GTDC1-204ENST00000392869 ZBTB47Q9UFB7 747 aaPredicted RBP8.58□□□□□ -1.04
GTDC1-204ENST00000392869 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
GTDC1-204ENST00000392869 ATP1B4Q9UN42 357 aaPredicted RBP8.55□□□□□ -1.04
GTDC1-204ENST00000392869 RANGAP1P46060 587 aaPredicted RBP8.54□□□□□ -1.04
GTDC1-204ENST00000392869 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
GTDC1-204ENST00000392869 ANP32EQ9BTT0 268 aa8.52□□□□□ -1.05
GTDC1-204ENST00000392869 ANP32AP39687 249 aaKnown RBP8.51□□□□□ -1.05
GTDC1-204ENST00000392869 HRCP23327 699 aa8.51□□□□□ -1.05
GTDC1-204ENST00000392869 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
GTDC1-204ENST00000392869 TNNT2P45379 298 aaPredicted RBP8.47□□□□□ -1.05
GTDC1-204ENST00000392869 UPF2Q9HAU5 1272 aaKnown RBP8.45□□□□□ -1.06
GTDC1-204ENST00000392869 TRIM44Q96DX7 344 aaPredicted RBP8.44□□□□□ -1.06
GTDC1-204ENST00000392869 NCLP19338 710 aaKnown RBP8.42□□□□□ -1.06
GTDC1-204ENST00000392869 DIEXFQ68CQ4 756 aaKnown RBP8.41□□□□□ -1.06
GTDC1-204ENST00000392869 ACIN1Q9UKV3 1341 aaKnown RBP8.38□□□□□ -1.07
GTDC1-204ENST00000392869 ANP32CO43423 234 aa8.37□□□□□ -1.07
GTDC1-204ENST00000392869 CDK11BP21127 795 aaKnown RBP8.33□□□□□ -1.08
GTDC1-204ENST00000392869 HSP90AA1P07900 732 aaKnown RBP8.3□□□□□ -1.08
GTDC1-204ENST00000392869 CANXP27824 592 aaKnown RBP8.29□□□□□ -1.08
GTDC1-204ENST00000392869 ARID4BQ4LE39 1312 aaPredicted RBP8.29□□□□□ -1.08
GTDC1-204ENST00000392869 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.28□□□□□ -1.08
GTDC1-204ENST00000392869 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
GTDC1-204ENST00000392869 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.25□□□□□ -1.09
GTDC1-204ENST00000392869 HNRNPUL2Q1KMD3 747 aaKnown RBP8.25□□□□□ -1.09
GTDC1-204ENST00000392869 GOLGA6L22H0YM25 854 aa8.24□□□□□ -1.09
GTDC1-204ENST00000392869 ERICH6BQ5W0A0 696 aa8.23□□□□□ -1.09
GTDC1-204ENST00000392869 BECN1Q14457 450 aa8.22□□□□□ -1.09
GTDC1-204ENST00000392869 L1TD1Q5T7N2 865 aaKnown RBP8.22□□□□□ -1.09
GTDC1-204ENST00000392869 POLR3GLQ9BT43 218 aa8.22□□□□□ -1.09
GTDC1-204ENST00000392869 USP35Q9P2H5 1018 aa8.21□□□□□ -1.1
GTDC1-204ENST00000392869 SLC4A1APQ9BWU0 796 aaKnown RBP8.2□□□□□ -1.1
GTDC1-204ENST00000392869 NEUROD1Q13562 356 aa8.2□□□□□ -1.1
GTDC1-204ENST00000392869 GOLGA6L6A8MZA4 724 aa8.2□□□□□ -1.1
GTDC1-204ENST00000392869 PPARGC1BQ86YN6 1023 aaKnown RBP8.2□□□□□ -1.1
GTDC1-204ENST00000392869 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
GTDC1-204ENST00000392869 NRDCO43847 1150 aa8.19□□□□□ -1.1
GTDC1-204ENST00000392869 ITGAEP38570 1179 aa8.19□□□□□ -1.1
GTDC1-204ENST00000392869 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
GTDC1-204ENST00000392869 PTMSP20962 102 aa8.15□□□□□ -1.11
GTDC1-204ENST00000392869 ZRSR1Q15695 479 aaKnown RBP8.13□□□□□ -1.11
GTDC1-204ENST00000392869 CHMP4BQ9H444 224 aaKnown RBP8.13□□□□□ -1.11
GTDC1-204ENST00000392869 PPM1GO15355 546 aaPredicted RBP8.12□□□□□ -1.11
GTDC1-204ENST00000392869 CHAF1AQ13111 956 aaPredicted RBP8.12□□□□□ -1.11
GTDC1-204ENST00000392869 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
GTDC1-204ENST00000392869 CHIC1Q5VXU3 224 aa8.11□□□□□ -1.11
GTDC1-204ENST00000392869 CASC1Q6TDU7 716 aa8.1□□□□□ -1.11
GTDC1-204ENST00000392869 SLC24A1O60721 1099 aa8.06□□□□□ -1.12
GTDC1-204ENST00000392869 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
GTDC1-204ENST00000392869 TRIM52Q96A61 297 aa8.06□□□□□ -1.12
GTDC1-204ENST00000392869 FAM50AQ14320 339 aaKnown RBP8.03□□□□□ -1.12
GTDC1-204ENST00000392869 CCDC136Q96JN2 1154 aa8.02□□□□□ -1.12
GTDC1-204ENST00000392869 DCAF1Q9Y4B6 1507 aa8.01□□□□□ -1.13
GTDC1-204ENST00000392869 DNTTIP2Q5QJE6 756 aaKnown RBP8.01□□□□□ -1.13
GTDC1-204ENST00000392869 MS4A1P11836 297 aa8.01□□□□□ -1.13
GTDC1-204ENST00000392869 TONSLQ96HA7 1378 aa8.01□□□□□ -1.13
GTDC1-204ENST00000392869 LOC105371045A0A1W2PR82 267 aa8□□□□□ -1.13
GTDC1-204ENST00000392869 PTMAP06454 111 aaKnown RBP7.99□□□□□ -1.13
GTDC1-204ENST00000392869 CALRP27797 417 aaKnown RBP7.97□□□□□ -1.13
GTDC1-204ENST00000392869 MSNP26038 577 aaKnown RBP7.97□□□□□ -1.13
GTDC1-204ENST00000392869 NPM2Q86SE8 214 aaKnown RBP7.97□□□□□ -1.13
GTDC1-204ENST00000392869 WDR43Q15061 677 aaKnown RBP eCLIP7.96□□□□□ -1.13
GTDC1-204ENST00000392869 ZNF326Q5BKZ1 582 aaKnown RBP7.96□□□□□ -1.13
GTDC1-204ENST00000392869 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
GTDC1-204ENST00000392869 SETQ01105 290 aaPredicted RBP7.96□□□□□ -1.14
GTDC1-204ENST00000392869 HAP1P54257 671 aaPredicted RBP7.96□□□□□ -1.14
GTDC1-204ENST00000392869 CDCA8Q53HL2 280 aa7.95□□□□□ -1.14
GTDC1-204ENST00000392869 FKBP8Q14318 412 aa7.95□□□□□ -1.14
GTDC1-204ENST00000392869 BCANQ96GW7 911 aa7.94□□□□□ -1.14
GTDC1-204ENST00000392869 TMC1Q8TDI8 760 aa7.94□□□□□ -1.14
GTDC1-204ENST00000392869 CCDC34Q96HJ3 373 aa7.94□□□□□ -1.14
GTDC1-204ENST00000392869 A0A0U1RQG5 324 aaPredicted RBP7.93□□□□□ -1.14
GTDC1-204ENST00000392869 KIAA2012Q0VF49 1180 aa7.93□□□□□ -1.14
GTDC1-204ENST00000392869 GOLGA6L1Q8N7Z2 621 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms