Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 AL359922.2-201ENST00000581788 3017 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 SSX3-202ENST00000376893 800 ntTSL 2 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 SNORA11-201ENST00000408789 128 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 MYL6P5-201ENST00000412707 459 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 PRUNEP1-201ENST00000425846 705 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 PA2G4P6-201ENST00000438325 1197 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 RN7SL570P-201ENST00000484405 292 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 GSTP1P1-201ENST00000548078 319 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 AC007494.1-201ENST00000562293 760 ntBASIC9.73□□□□□ -0.85
TOPBP1Q92547 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
TOPBP1Q92547 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC9.73□□□□□ -0.85
TOPBP1Q92547 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TOPBP1Q92547 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TOPBP1Q92547 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOPBP1Q92547 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
TOPBP1Q92547 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 OR7A15P-201ENST00000449848 1009 ntBASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AC093890.1-201ENST00000502554 540 ntBASIC9.72□□□□□ -0.85
TOPBP1Q92547 AP001922.4-201ENST00000526967 290 ntBASIC9.72□□□□□ -0.85
TOPBP1Q92547 OR4A40P-201ENST00000533878 948 ntBASIC9.72□□□□□ -0.85
TOPBP1Q92547 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC9.72□□□□□ -0.85
TOPBP1Q92547 LINC01739-205ENST00000641890 573 ntBASIC9.72□□□□□ -0.85
TOPBP1Q92547 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TOPBP1Q92547 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC9.71□□□□□ -0.85
TOPBP1Q92547 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC9.71□□□□□ -0.85
TOPBP1Q92547 PTPRT-207ENST00000373201 12660 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
TOPBP1Q92547 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TOPBP1Q92547 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
TOPBP1Q92547 ZNF658B-201ENST00000602828 3408 ntBASIC9.71□□□□□ -0.85
TOPBP1Q92547 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.71□□□□□ -0.85
TOPBP1Q92547 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TOPBP1Q92547 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 OR6D1P-201ENST00000436165 939 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 AZGP1P2-201ENST00000454506 345 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 MIR5095-201ENST00000578844 88 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 FAM25E-202ENST00000608562 189 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 uc_338.18-201ENST00000615451 175 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 AC091953.3-201ENST00000623220 236 ntBASIC9.71□□□□□ -0.86
TOPBP1Q92547 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
TOPBP1Q92547 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
TOPBP1Q92547 OR1M1-202ENST00000641627 2535 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
TOPBP1Q92547 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 MIR133B-201ENST00000362210 119 ntBASIC9.7□□□□□ -0.86
TOPBP1Q92547 MIR141-201ENST00000384975 95 ntBASIC9.7□□□□□ -0.86
TOPBP1Q92547 AL672167.3-201ENST00000465951 960 ntBASIC9.7□□□□□ -0.86
TOPBP1Q92547 OR51A1P-201ENST00000511110 946 ntBASIC9.7□□□□□ -0.86
TOPBP1Q92547 NOP10-202ENST00000557912 436 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.1 ms