RNA–Protein interactions for RNA: ENST00000500989.2

LINC00861-201, long intergenic non-protein coding RNA 861, humanhuman

TSL 1 (best) BASIC

Gene LINC00861, Length 5,330 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00861-201ENST00000500989 NISCHQ9Y2I1 1504 aa13.74□□□□□ -0.21
LINC00861-201ENST00000500989 DCAF8L2P0C7V8 631 aa12.54□□□□□ -0.4
LINC00861-201ENST00000500989 SUPT5HO00267 1087 aaKnown RBP12.42□□□□□ -0.42
LINC00861-201ENST00000500989 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
LINC00861-201ENST00000500989 PCGF6Q9BYE7 350 aa11.77□□□□□ -0.53
LINC00861-201ENST00000500989 CHIC1Q5VXU3 224 aa11.65□□□□□ -0.54
LINC00861-201ENST00000500989 EHMT2Q96KQ7 1210 aa11.6□□□□□ -0.55
LINC00861-201ENST00000500989 HRCP23327 699 aa11.58□□□□□ -0.56
LINC00861-201ENST00000500989 TRIM41Q8WV44 630 aa11.58□□□□□ -0.56
LINC00861-201ENST00000500989 ZEB1P37275 1124 aaPredicted RBP11.58□□□□□ -0.56
LINC00861-201ENST00000500989 FAM9AQ8IZU1 332 aaPredicted RBP11.56□□□□□ -0.56
LINC00861-201ENST00000500989 ZCCHC6Q5VYS8 1495 aaKnown RBP11.54□□□□□ -0.56
LINC00861-201ENST00000500989 CCDC180Q9P1Z9 1646 aa11.49□□□□□ -0.57
LINC00861-201ENST00000500989 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
LINC00861-201ENST00000500989 LOC105371045A0A1W2PR82 267 aa11.41□□□□□ -0.58
LINC00861-201ENST00000500989 APLP2Q06481 763 aa11.34□□□□□ -0.59
LINC00861-201ENST00000500989 CCER1Q8TC90 406 aaPredicted RBP11.31□□□□□ -0.6
LINC00861-201ENST00000500989 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
LINC00861-201ENST00000500989 PPARGC1BQ86YN6 1023 aaKnown RBP11.24□□□□□ -0.61
LINC00861-201ENST00000500989 CENPBP07199 599 aaPredicted RBP11.23□□□□□ -0.61
LINC00861-201ENST00000500989 PELP1Q8IZL8 1130 aaKnown RBP11.22□□□□□ -0.61
LINC00861-201ENST00000500989 DCAF1Q9Y4B6 1507 aa11.21□□□□□ -0.62
LINC00861-201ENST00000500989 UBTFP17480 764 aaKnown RBP11.21□□□□□ -0.62
LINC00861-201ENST00000500989 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
LINC00861-201ENST00000500989 ABCC9O60706 1549 aa11.1□□□□□ -0.63
LINC00861-201ENST00000500989 SCRIBQ14160 1630 aa11.09□□□□□ -0.63
LINC00861-201ENST00000500989 RANGAP1P46060 587 aaPredicted RBP11.05□□□□□ -0.64
LINC00861-201ENST00000500989 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.99□□□□□ -0.65
LINC00861-201ENST00000500989 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
LINC00861-201ENST00000500989 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
LINC00861-201ENST00000500989 DIEXFQ68CQ4 756 aaKnown RBP10.92□□□□□ -0.66
LINC00861-201ENST00000500989 HNRNPUL2Q1KMD3 747 aaKnown RBP10.89□□□□□ -0.67
LINC00861-201ENST00000500989 MYT1Q01538 1121 aa10.88□□□□□ -0.67
LINC00861-201ENST00000500989 RB1CC1Q8TDY2 1594 aa10.86□□□□□ -0.67
LINC00861-201ENST00000500989 NACADO15069 1562 aa10.86□□□□□ -0.67
LINC00861-201ENST00000500989 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
LINC00861-201ENST00000500989 ATP1B4Q9UN42 357 aaPredicted RBP10.83□□□□□ -0.68
LINC00861-201ENST00000500989 PABPN1Q86U42 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
LINC00861-201ENST00000500989 ZNF316A6NFI3 1004 aaPredicted RBP10.77□□□□□ -0.69
LINC00861-201ENST00000500989 ACIN1Q9UKV3 1341 aaKnown RBP10.75□□□□□ -0.69
LINC00861-201ENST00000500989 ITGAEP38570 1179 aa10.72□□□□□ -0.69
LINC00861-201ENST00000500989 NEFLP07196 543 aa10.72□□□□□ -0.69
LINC00861-201ENST00000500989 GTF3C3Q9Y5Q9 886 aa10.72□□□□□ -0.69
LINC00861-201ENST00000500989 EEA1Q15075 1411 aa10.71□□□□□ -0.7
LINC00861-201ENST00000500989 BAZ1AQ9NRL2 1556 aaPredicted RBP10.69□□□□□ -0.7
LINC00861-201ENST00000500989 CECR2Q9BXF3 1484 aa10.69□□□□□ -0.7
LINC00861-201ENST00000500989 CEP162Q5TB80 1403 aa10.65□□□□□ -0.7
LINC00861-201ENST00000500989 MROH2BQ7Z745 1585 aa10.64□□□□□ -0.71
LINC00861-201ENST00000500989 TNIKQ9UKE5 1360 aa10.63□□□□□ -0.71
LINC00861-201ENST00000500989 GOLGA3Q08378 1498 aa10.63□□□□□ -0.71
LINC00861-201ENST00000500989 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
LINC00861-201ENST00000500989 ERICH6Q7L0X2 663 aa10.6□□□□□ -0.71
LINC00861-201ENST00000500989 CLIP1P30622 1438 aa10.58□□□□□ -0.72
LINC00861-201ENST00000500989 FAM50AQ14320 339 aaKnown RBP10.57□□□□□ -0.72
LINC00861-201ENST00000500989 WRNQ14191 1432 aaPredicted RBP eCLIP10.57□□□□□ -0.72
LINC00861-201ENST00000500989 NEUROD1Q13562 356 aa10.56□□□□□ -0.72
LINC00861-201ENST00000500989 WIZO95785 1651 aa10.55□□□□□ -0.72
LINC00861-201ENST00000500989 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
LINC00861-201ENST00000500989 CCDC88BA6NC98 1476 aa10.52□□□□□ -0.73
LINC00861-201ENST00000500989 TOP2AP11388 1531 aaKnown RBP10.51□□□□□ -0.73
LINC00861-201ENST00000500989 CLSPNQ9HAW4 1339 aa10.51□□□□□ -0.73
LINC00861-201ENST00000500989 SOGA1O94964 1423 aa10.49□□□□□ -0.73
LINC00861-201ENST00000500989 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
LINC00861-201ENST00000500989 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
LINC00861-201ENST00000500989 ANP32CO43423 234 aa10.45□□□□□ -0.74
LINC00861-201ENST00000500989 MIER1Q8N108 512 aa10.44□□□□□ -0.74
LINC00861-201ENST00000500989 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
LINC00861-201ENST00000500989 P3H3Q8IVL6 736 aa10.4□□□□□ -0.75
LINC00861-201ENST00000500989 TRIM52Q96A61 297 aa10.39□□□□□ -0.75
LINC00861-201ENST00000500989 KIF27Q86VH2 1401 aa10.38□□□□□ -0.75
LINC00861-201ENST00000500989 VPS8Q8N3P4 1428 aa10.38□□□□□ -0.75
LINC00861-201ENST00000500989 BCANQ96GW7 911 aa10.35□□□□□ -0.75
LINC00861-201ENST00000500989 SMARCA2P51531 1590 aa10.35□□□□□ -0.75
LINC00861-201ENST00000500989 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
LINC00861-201ENST00000500989 TONSLQ96HA7 1378 aa10.32□□□□□ -0.76
LINC00861-201ENST00000500989 DDX10Q13206 875 aaKnown RBP10.3□□□□□ -0.76
LINC00861-201ENST00000500989 RUSC2Q8N2Y8 1516 aa10.27□□□□□ -0.77
LINC00861-201ENST00000500989 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.77
LINC00861-201ENST00000500989 CCNB3Q8WWL7 1395 aa10.26□□□□□ -0.77
LINC00861-201ENST00000500989 FKBP8Q14318 412 aa10.26□□□□□ -0.77
LINC00861-201ENST00000500989 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
LINC00861-201ENST00000500989 ATAD2BQ9ULI0 1458 aa10.24□□□□□ -0.77
LINC00861-201ENST00000500989 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
LINC00861-201ENST00000500989 RAPGEF2Q9Y4G8 1499 aa10.23□□□□□ -0.77
LINC00861-201ENST00000500989 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
LINC00861-201ENST00000500989 KANK4Q5T7N3 995 aaPredicted RBP10.2□□□□□ -0.78
LINC00861-201ENST00000500989 CUX2O14529 1486 aa10.19□□□□□ -0.78
LINC00861-201ENST00000500989 CARMIL1Q5VZK9 1371 aa10.19□□□□□ -0.78
LINC00861-201ENST00000500989 TIMELESSQ9UNS1 1208 aa10.18□□□□□ -0.78
LINC00861-201ENST00000500989 KIF21BO75037 1637 aa10.18□□□□□ -0.78
LINC00861-201ENST00000500989 HNRNPUQ00839 825 aaKnown RBP eCLIP10.17□□□□□ -0.78
LINC00861-201ENST00000500989 ZNF326Q5BKZ1 582 aaKnown RBP10.17□□□□□ -0.78
LINC00861-201ENST00000500989 SETD5Q9C0A6 1442 aa10.17□□□□□ -0.78
LINC00861-201ENST00000500989 ARID3CA6NKF2 412 aa10.16□□□□□ -0.78
LINC00861-201ENST00000500989 DAXXQ9UER7 740 aaPredicted RBP10.15□□□□□ -0.78
LINC00861-201ENST00000500989 CHIC2Q9UKJ5 165 aa10.14□□□□□ -0.79
LINC00861-201ENST00000500989 SUPT16HQ9Y5B9 1047 aaKnown RBP10.14□□□□□ -0.79
LINC00861-201ENST00000500989 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
LINC00861-201ENST00000500989 SIN3AQ96ST3 1273 aa10.13□□□□□ -0.79
LINC00861-201ENST00000500989 HIRIP3Q9BW71 556 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms