Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 uc_338.18-201ENST00000615451 175 ntBASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
SNAPC4Q5SXM2 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 EEF1A1P30-201ENST00000429708 1315 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 GTF2IP4-201ENST00000453092 2054 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC019185.1-201ENST00000442718 389 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 SDC4P-201ENST00000453285 601 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 HIGD1AP8-201ENST00000453927 274 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC126177.5-201ENST00000549599 178 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC013731.1-201ENST00000604340 883 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC010245.2-201ENST00000606908 1167 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AL445528.2-201ENST00000620582 470 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 AC112255.1-201ENST00000624070 2493 ntBASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SNAPC4Q5SXM2 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 AL159987.1-201ENST00000347911 293 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 HIST1H3PS1-201ENST00000404612 417 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 RNU6ATAC18P-201ENST00000408413 101 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 EIF4EBP2P1-201ENST00000450009 343 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 AZGP1P2-201ENST00000454506 345 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 AC090142.2-201ENST00000483263 416 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 AC093890.1-201ENST00000502554 540 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 RPEP1-201ENST00000504507 658 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 SCARNA6.1-201ENST00000516989 238 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 GARSP1-201ENST00000570895 719 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 AC131971.1-201ENST00000332881 1482 ntBASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SNAPC4Q5SXM2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 TPT1-204ENST00000379060 764 ntTSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL772161.1-201ENST00000439130 476 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 RAB28P2-201ENST00000454299 641 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 RPL7P39-201ENST00000481157 744 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL671862.1-201ENST00000515851 349 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 MIR5095-201ENST00000578844 88 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL390318.1-201ENST00000624564 687 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AC003992.1-201ENST00000635364 557 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AC022905.1-201ENST00000503430 3048 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AL161912.4-201ENST00000623889 2468 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 AC092692.1-201ENST00000623625 2595 ntBASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
SNAPC4Q5SXM2 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
SNAPC4Q5SXM2 RNU1-77P-201ENST00000390868 162 ntBASIC9.6□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms