RNA–Protein interactions for RNA: ENST00000434998.5

CARF-212, Transcript of calcium responsive transcription factor, humanhuman

TSL 1 (best) BASIC

Gene CARF, Length 1,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-212ENST00000434998 AEBP2Q6ZN18 517 aaPredicted RBP17.71■□□□□ 0.43
CARF-212ENST00000434998 CHIC1Q5VXU3 224 aa17.5■□□□□ 0.39
CARF-212ENST00000434998 PHF23Q9BUL5 403 aaPredicted RBP15.56■□□□□ 0.08
CARF-212ENST00000434998 POTEDQ86YR6 584 aa15.19■□□□□ 0.02
CARF-212ENST00000434998 SENP3Q9H4L4 574 aaPredicted RBP14.8□□□□□ -0.04
CARF-212ENST00000434998 PLPPR3Q6T4P5 718 aa14.33□□□□□ -0.12
CARF-212ENST00000434998 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
CARF-212ENST00000434998 FOXD1Q16676 465 aa13.82□□□□□ -0.2
CARF-212ENST00000434998 PPP6R1Q9UPN7 881 aa13.66□□□□□ -0.22
CARF-212ENST00000434998 ADRA2BP18089 450 aa13.64□□□□□ -0.23
CARF-212ENST00000434998 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
CARF-212ENST00000434998 KCNA4P22459 653 aa12.92□□□□□ -0.34
CARF-212ENST00000434998 PPP4R3CPQ6ZMV5 832 aa12.73□□□□□ -0.37
CARF-212ENST00000434998 EHMT2Q96KQ7 1210 aa12.49□□□□□ -0.41
CARF-212ENST00000434998 MSH5O43196 834 aa12.45□□□□□ -0.42
CARF-212ENST00000434998 NCBP3Q53F19 620 aaKnown RBP12.38□□□□□ -0.43
CARF-212ENST00000434998 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
CARF-212ENST00000434998 MAPK8IP2Q13387 824 aaPredicted RBP12.32□□□□□ -0.44
CARF-212ENST00000434998 SLC4A1APQ9BWU0 796 aaKnown RBP12.29□□□□□ -0.44
CARF-212ENST00000434998 CCDC180Q9P1Z9 1646 aa12.25□□□□□ -0.45
CARF-212ENST00000434998 SCAF1Q9H7N4 1312 aaKnown RBP12.25□□□□□ -0.45
CARF-212ENST00000434998 CNKSR2Q8WXI2 1034 aa12.23□□□□□ -0.45
CARF-212ENST00000434998 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
CARF-212ENST00000434998 ZBTB22O15209 634 aa11.95□□□□□ -0.5
CARF-212ENST00000434998 RNF216Q9NWF9 866 aaPredicted RBP11.9□□□□□ -0.5
CARF-212ENST00000434998 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
CARF-212ENST00000434998 ZCCHC6Q5VYS8 1495 aaKnown RBP11.86□□□□□ -0.51
CARF-212ENST00000434998 HOXD11P31277 338 aaPredicted RBP11.78□□□□□ -0.52
CARF-212ENST00000434998 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
CARF-212ENST00000434998 FOXD4L1Q9NU39 408 aa11.67□□□□□ -0.54
CARF-212ENST00000434998 DCAF1Q9Y4B6 1507 aa11.67□□□□□ -0.54
CARF-212ENST00000434998 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
CARF-212ENST00000434998 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
CARF-212ENST00000434998 SHROOM4Q9ULL8 1493 aa11.59□□□□□ -0.55
CARF-212ENST00000434998 MYO15BQ96JP2 1530 aa11.51□□□□□ -0.57
CARF-212ENST00000434998 DCAF8L1A6NGE4 600 aa11.47□□□□□ -0.57
CARF-212ENST00000434998 ABCC9O60706 1549 aa11.47□□□□□ -0.57
CARF-212ENST00000434998 POTEHQ6S545 545 aa11.41□□□□□ -0.58
CARF-212ENST00000434998 NACADO15069 1562 aa11.39□□□□□ -0.59
CARF-212ENST00000434998 MYCNP04198 464 aaPredicted RBP11.3□□□□□ -0.6
CARF-212ENST00000434998 RB1CC1Q8TDY2 1594 aa11.27□□□□□ -0.61
CARF-212ENST00000434998 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.26□□□□□ -0.61
CARF-212ENST00000434998 SUPT5HO00267 1087 aaKnown RBP11.25□□□□□ -0.61
CARF-212ENST00000434998 SCRIBQ14160 1630 aa11.23□□□□□ -0.61
CARF-212ENST00000434998 ATF5Q9Y2D1 282 aaPredicted RBP11.17□□□□□ -0.62
CARF-212ENST00000434998 U3KPZ7 1027 aaPredicted RBP11.16□□□□□ -0.62
CARF-212ENST00000434998 ATXN8OSP0DMR3 200 aa11.14□□□□□ -0.63
CARF-212ENST00000434998 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
CARF-212ENST00000434998 RSF1Q96T23 1441 aaPredicted RBP11□□□□□ -0.65
CARF-212ENST00000434998 CACNB1Q02641 598 aaPredicted RBP10.99□□□□□ -0.65
CARF-212ENST00000434998 SAMD1Q6SPF0 538 aaPredicted RBP10.98□□□□□ -0.65
CARF-212ENST00000434998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
CARF-212ENST00000434998 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
CARF-212ENST00000434998 CECR2Q9BXF3 1484 aa10.95□□□□□ -0.66
CARF-212ENST00000434998 FKBP8Q14318 412 aa10.92□□□□□ -0.66
CARF-212ENST00000434998 MROH2BQ7Z745 1585 aa10.9□□□□□ -0.66
CARF-212ENST00000434998 BICRAQ9NZM4 1560 aa10.89□□□□□ -0.67
CARF-212ENST00000434998 BAZ1AQ9NRL2 1556 aaPredicted RBP10.86□□□□□ -0.67
CARF-212ENST00000434998 WIZO95785 1651 aa10.83□□□□□ -0.68
CARF-212ENST00000434998 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
CARF-212ENST00000434998 SPINK5Q9NQ38 1064 aaPredicted RBP10.81□□□□□ -0.68
CARF-212ENST00000434998 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
CARF-212ENST00000434998 SMARCA4P51532 1647 aa10.8□□□□□ -0.68
CARF-212ENST00000434998 RNF39Q9H2S5 420 aa10.79□□□□□ -0.68
CARF-212ENST00000434998 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
CARF-212ENST00000434998 TOP2AP11388 1531 aaKnown RBP10.7□□□□□ -0.7
CARF-212ENST00000434998 APLP2Q06481 763 aa10.69□□□□□ -0.7
CARF-212ENST00000434998 CAPN15O75808 1086 aa10.68□□□□□ -0.7
CARF-212ENST00000434998 PEG3Q9GZU2 1588 aa10.68□□□□□ -0.7
CARF-212ENST00000434998 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
CARF-212ENST00000434998 POLA2Q14181 598 aa10.65□□□□□ -0.71
CARF-212ENST00000434998 SMARCA2P51531 1590 aa10.61□□□□□ -0.71
CARF-212ENST00000434998 CCDC88BA6NC98 1476 aa10.61□□□□□ -0.71
CARF-212ENST00000434998 RTN4Q9NQC3 1192 aaKnown RBP10.61□□□□□ -0.71
CARF-212ENST00000434998 C1QBPQ07021 282 aaKnown RBP10.6□□□□□ -0.71
CARF-212ENST00000434998 ATAD2BQ9ULI0 1458 aa10.59□□□□□ -0.71
CARF-212ENST00000434998 EIF4G1Q04637 1599 aaKnown RBP10.58□□□□□ -0.72
CARF-212ENST00000434998 ABCB7O75027 752 aa10.58□□□□□ -0.72
CARF-212ENST00000434998 TRIM41Q8WV44 630 aa10.57□□□□□ -0.72
CARF-212ENST00000434998 PLSCR2Q9NRY7 297 aa10.57□□□□□ -0.72
CARF-212ENST00000434998 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
CARF-212ENST00000434998 SPDYE4A6NLX3 237 aa10.52□□□□□ -0.73
CARF-212ENST00000434998 HMGXB3Q12766 1538 aa10.49□□□□□ -0.73
CARF-212ENST00000434998 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
CARF-212ENST00000434998 LOC105371045A0A1W2PR82 267 aa10.47□□□□□ -0.73
CARF-212ENST00000434998 FBLN2P98095 1184 aa10.46□□□□□ -0.73
CARF-212ENST00000434998 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
CARF-212ENST00000434998 DNAJC5Q9H3Z4 198 aa10.43□□□□□ -0.74
CARF-212ENST00000434998 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
CARF-212ENST00000434998 DSG3P32926 999 aa10.41□□□□□ -0.74
CARF-212ENST00000434998 FAM9AQ8IZU1 332 aaPredicted RBP10.37□□□□□ -0.75
CARF-212ENST00000434998 CC2D2AQ9P2K1 1620 aa10.37□□□□□ -0.75
CARF-212ENST00000434998 PROM2Q8N271 834 aa10.34□□□□□ -0.75
CARF-212ENST00000434998 WRNQ14191 1432 aaPredicted RBP eCLIP10.34□□□□□ -0.75
CARF-212ENST00000434998 OSCARQ8IYS5 282 aa10.29□□□□□ -0.76
CARF-212ENST00000434998 SYNJ1O43426 1573 aa10.29□□□□□ -0.76
CARF-212ENST00000434998 CFTRP13569 1480 aa10.28□□□□□ -0.76
CARF-212ENST00000434998 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
CARF-212ENST00000434998 EEA1Q15075 1411 aa10.28□□□□□ -0.76
CARF-212ENST00000434998 FBXO3Q9UK99 471 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms