Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.02□□□□□ -1.45
CDH1P12830 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 DYNLL1P1-201ENST00000595442 269 ntBASIC6.02□□□□□ -1.45
CDH1P12830 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.02□□□□□ -1.45
CDH1P12830 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 AL133406.3-201ENST00000606817 541 ntBASIC6.02□□□□□ -1.45
CDH1P12830 AC022106.1-201ENST00000612834 766 ntBASIC6.02□□□□□ -1.45
CDH1P12830 AC010998.3-201ENST00000613871 631 ntBASIC6.02□□□□□ -1.45
CDH1P12830 uc_338.29-201ENST00000615099 168 ntBASIC6.02□□□□□ -1.45
CDH1P12830 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH1P12830 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CDH1P12830 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC6.02□□□□□ -1.45
CDH1P12830 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 AC232271.1-201ENST00000602455 2715 ntBASIC6.02□□□□□ -1.45
CDH1P12830 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.02□□□□□ -1.45
CDH1P12830 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CDH1P12830 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CDH1P12830 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH1P12830 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
CDH1P12830 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 NLRP3P1-201ENST00000622303 1785 ntBASIC6.01□□□□□ -1.45
CDH1P12830 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 RN7SKP250-201ENST00000363924 321 ntBASIC6.01□□□□□ -1.45
CDH1P12830 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.01□□□□□ -1.45
CDH1P12830 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CDH1P12830 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH1P12830 RN7SL552P-201ENST00000462094 276 ntBASIC6.01□□□□□ -1.45
CDH1P12830 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 MTND3P6-201ENST00000485242 339 ntBASIC6.01□□□□□ -1.45
CDH1P12830 AC106822.1-201ENST00000502647 526 ntBASIC6.01□□□□□ -1.45
CDH1P12830 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 Y_RNA.710-201ENST00000516975 110 ntBASIC6.01□□□□□ -1.45
CDH1P12830 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 AP001858.2-201ENST00000536213 601 ntBASIC6.01□□□□□ -1.45
CDH1P12830 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.01□□□□□ -1.45
CDH1P12830 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH1P12830 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.01□□□□□ -1.45
CDH1P12830 AC093524.1-201ENST00000564266 1094 ntBASIC6.01□□□□□ -1.45
CDH1P12830 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.01□□□□□ -1.45
CDH1P12830 AC009120.7-201ENST00000623452 780 ntBASIC6.01□□□□□ -1.45
CDH1P12830 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH1P12830 OR7A1P-202ENST00000641542 1158 ntBASIC6.01□□□□□ -1.45
CDH1P12830 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.01□□□□□ -1.45
CDH1P12830 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.01□□□□□ -1.45
CDH1P12830 AL731532.1-201ENST00000623972 4236 ntBASIC6.01□□□□□ -1.45
CDH1P12830 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
CDH1P12830 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CDH1P12830 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH1P12830 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6□□□□□ -1.45
CDH1P12830 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6□□□□□ -1.45
CDH1P12830 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6□□□□□ -1.45
CDH1P12830 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH1P12830 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CDH1P12830 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6□□□□□ -1.45
CDH1P12830 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6□□□□□ -1.45
CDH1P12830 RNU1-49P-201ENST00000363468 159 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms