RNA–Protein interactions for RNA: ENST00000631029.1

UBA3-213, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-213ENST00000631029 NISCHQ9Y2I1 1504 aa12.68□□□□□ -0.38
UBA3-213ENST00000631029 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
UBA3-213ENST00000631029 ZCCHC6Q5VYS8 1495 aaKnown RBP10.8□□□□□ -0.68
UBA3-213ENST00000631029 DCAF1Q9Y4B6 1507 aa10.57□□□□□ -0.72
UBA3-213ENST00000631029 SHROOM4Q9ULL8 1493 aa10.5□□□□□ -0.73
UBA3-213ENST00000631029 ABCC9O60706 1549 aa10.34□□□□□ -0.75
UBA3-213ENST00000631029 SUPT5HO00267 1087 aaKnown RBP10.32□□□□□ -0.76
UBA3-213ENST00000631029 MYO15BQ96JP2 1530 aa10.3□□□□□ -0.76
UBA3-213ENST00000631029 CHIC1Q5VXU3 224 aa10.27□□□□□ -0.77
UBA3-213ENST00000631029 HRCP23327 699 aa10.1□□□□□ -0.79
UBA3-213ENST00000631029 DNAJC5BQ9UF47 199 aa10.05□□□□□ -0.8
UBA3-213ENST00000631029 RSF1Q96T23 1441 aaPredicted RBP10.02□□□□□ -0.81
UBA3-213ENST00000631029 DCAF8L2P0C7V8 631 aa9.99□□□□□ -0.81
UBA3-213ENST00000631029 RB1CC1Q8TDY2 1594 aa9.98□□□□□ -0.81
UBA3-213ENST00000631029 NACADO15069 1562 aa9.96□□□□□ -0.82
UBA3-213ENST00000631029 SCRIBQ14160 1630 aa9.96□□□□□ -0.82
UBA3-213ENST00000631029 PCGF6Q9BYE7 350 aa9.86□□□□□ -0.83
UBA3-213ENST00000631029 EIF4G1Q04637 1599 aaKnown RBP9.85□□□□□ -0.83
UBA3-213ENST00000631029 LOC105371045A0A1W2PR82 267 aa9.82□□□□□ -0.84
UBA3-213ENST00000631029 MROH2BQ7Z745 1585 aa9.81□□□□□ -0.84
UBA3-213ENST00000631029 BAZ1AQ9NRL2 1556 aaPredicted RBP9.8□□□□□ -0.84
UBA3-213ENST00000631029 TRIM26Q12899 539 aaPredicted RBP9.8□□□□□ -0.84
UBA3-213ENST00000631029 CECR2Q9BXF3 1484 aa9.79□□□□□ -0.84
UBA3-213ENST00000631029 WIZO95785 1651 aa9.74□□□□□ -0.85
UBA3-213ENST00000631029 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
UBA3-213ENST00000631029 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
UBA3-213ENST00000631029 TRIM41Q8WV44 630 aa9.69□□□□□ -0.86
UBA3-213ENST00000631029 ZEB1P37275 1124 aaPredicted RBP9.68□□□□□ -0.86
UBA3-213ENST00000631029 PABPN1Q86U42 306 aaKnown RBP eCLIP9.68□□□□□ -0.86
UBA3-213ENST00000631029 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
UBA3-213ENST00000631029 SMARCA2P51531 1590 aa9.62□□□□□ -0.87
UBA3-213ENST00000631029 WRNQ14191 1432 aaPredicted RBP eCLIP9.6□□□□□ -0.87
UBA3-213ENST00000631029 UNC13AQ9UPW8 1703 aa9.59□□□□□ -0.87
UBA3-213ENST00000631029 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
UBA3-213ENST00000631029 CCDC88BA6NC98 1476 aa9.56□□□□□ -0.88
UBA3-213ENST00000631029 EEA1Q15075 1411 aa9.54□□□□□ -0.88
UBA3-213ENST00000631029 BICRAQ9NZM4 1560 aa9.5□□□□□ -0.89
UBA3-213ENST00000631029 ABCC8Q09428 1581 aa9.49□□□□□ -0.89
UBA3-213ENST00000631029 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
UBA3-213ENST00000631029 FAM9AQ8IZU1 332 aaPredicted RBP9.47□□□□□ -0.89
UBA3-213ENST00000631029 CEP162Q5TB80 1403 aa9.44□□□□□ -0.9
UBA3-213ENST00000631029 KIF21BO75037 1637 aa9.43□□□□□ -0.9
UBA3-213ENST00000631029 SOGA1O94964 1423 aa9.41□□□□□ -0.9
UBA3-213ENST00000631029 GOLGA3Q08378 1498 aa9.4□□□□□ -0.9
UBA3-213ENST00000631029 RUSC2Q8N2Y8 1516 aa9.37□□□□□ -0.91
UBA3-213ENST00000631029 SYNJ1O43426 1573 aa9.37□□□□□ -0.91
UBA3-213ENST00000631029 BAZ1BQ9UIG0 1483 aaKnown RBP9.36□□□□□ -0.91
UBA3-213ENST00000631029 CEP164Q9UPV0 1460 aa9.35□□□□□ -0.91
UBA3-213ENST00000631029 CSRNP3Q8WYN3 585 aa9.35□□□□□ -0.91
UBA3-213ENST00000631029 ATAD2BQ9ULI0 1458 aa9.34□□□□□ -0.91
UBA3-213ENST00000631029 BIVM-ERCC5R4GMW8 1640 aa9.31□□□□□ -0.92
UBA3-213ENST00000631029 TOP2BQ02880 1626 aa9.3□□□□□ -0.92
UBA3-213ENST00000631029 SCAF1Q9H7N4 1312 aaKnown RBP9.3□□□□□ -0.92
UBA3-213ENST00000631029 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
UBA3-213ENST00000631029 CC2D2AQ9P2K1 1620 aa9.27□□□□□ -0.92
UBA3-213ENST00000631029 ERICH3Q5RHP9 1530 aa9.27□□□□□ -0.93
UBA3-213ENST00000631029 VPS8Q8N3P4 1428 aa9.27□□□□□ -0.93
UBA3-213ENST00000631029 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.26□□□□□ -0.93
UBA3-213ENST00000631029 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
UBA3-213ENST00000631029 CCER1Q8TC90 406 aaPredicted RBP9.25□□□□□ -0.93
UBA3-213ENST00000631029 EHMT2Q96KQ7 1210 aa9.24□□□□□ -0.93
UBA3-213ENST00000631029 CLIP1P30622 1438 aa9.23□□□□□ -0.93
UBA3-213ENST00000631029 DNAJC5Q9H3Z4 198 aa9.23□□□□□ -0.93
UBA3-213ENST00000631029 PRXQ9BXM0 1461 aa9.22□□□□□ -0.93
UBA3-213ENST00000631029 RAPGEF2Q9Y4G8 1499 aa9.21□□□□□ -0.93
UBA3-213ENST00000631029 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
UBA3-213ENST00000631029 NCAPD3P42695 1498 aa9.21□□□□□ -0.94
UBA3-213ENST00000631029 DIEXFQ68CQ4 756 aaKnown RBP9.17□□□□□ -0.94
UBA3-213ENST00000631029 CUX2O14529 1486 aa9.16□□□□□ -0.94
UBA3-213ENST00000631029 ARAP1Q96P48 1450 aa9.16□□□□□ -0.94
UBA3-213ENST00000631029 UBTFP17480 764 aaKnown RBP9.16□□□□□ -0.94
UBA3-213ENST00000631029 CLSPNQ9HAW4 1339 aa9.14□□□□□ -0.95
UBA3-213ENST00000631029 ZNF316A6NFI3 1004 aaPredicted RBP9.14□□□□□ -0.95
UBA3-213ENST00000631029 NEUROD1Q13562 356 aa9.14□□□□□ -0.95
UBA3-213ENST00000631029 CUX1P39880 1505 aa9.14□□□□□ -0.95
UBA3-213ENST00000631029 PRDM2Q13029 1718 aa9.14□□□□□ -0.95
UBA3-213ENST00000631029 CFTRP13569 1480 aa9.13□□□□□ -0.95
UBA3-213ENST00000631029 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
UBA3-213ENST00000631029 MAP3K1Q13233 1512 aa9.1□□□□□ -0.95
UBA3-213ENST00000631029 CENPBP07199 599 aaPredicted RBP9.09□□□□□ -0.95
UBA3-213ENST00000631029 KIF27Q86VH2 1401 aa9.07□□□□□ -0.96
UBA3-213ENST00000631029 DHX57Q6P158 1386 aaKnown RBP9.06□□□□□ -0.96
UBA3-213ENST00000631029 ARHGAP35Q9NRY4 1499 aa9.05□□□□□ -0.96
UBA3-213ENST00000631029 GTF3C3Q9Y5Q9 886 aa9.01□□□□□ -0.97
UBA3-213ENST00000631029 TTBK1Q5TCY1 1321 aaPredicted RBP9.01□□□□□ -0.97
UBA3-213ENST00000631029 TIAM1Q13009 1591 aa8.99□□□□□ -0.97
UBA3-213ENST00000631029 CFAP43Q8NDM7 1665 aa8.98□□□□□ -0.97
UBA3-213ENST00000631029 HNRNPUL2Q1KMD3 747 aaKnown RBP8.98□□□□□ -0.97
UBA3-213ENST00000631029 APLP2Q06481 763 aa8.97□□□□□ -0.97
UBA3-213ENST00000631029 IGF1RP08069 1367 aa8.97□□□□□ -0.97
UBA3-213ENST00000631029 CCNB3Q8WWL7 1395 aa8.97□□□□□ -0.97
UBA3-213ENST00000631029 KANK4Q5T7N3 995 aaPredicted RBP8.96□□□□□ -0.98
UBA3-213ENST00000631029 MIER1Q8N108 512 aa8.96□□□□□ -0.98
UBA3-213ENST00000631029 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
UBA3-213ENST00000631029 CADPSQ9ULU8 1353 aa8.95□□□□□ -0.98
UBA3-213ENST00000631029 AQRO60306 1485 aaKnown RBP eCLIP8.94□□□□□ -0.98
UBA3-213ENST00000631029 FGD5Q6ZNL6 1462 aa8.93□□□□□ -0.98
UBA3-213ENST00000631029 LRRC9Q6ZRR7 1453 aa8.93□□□□□ -0.98
UBA3-213ENST00000631029 EFCAB5A4FU69 1503 aa8.92□□□□□ -0.98
UBA3-213ENST00000631029 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms