Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 XIST-206ENST00000434839 2865 ntTSL 5 BASIC10.19□□□□□ -0.78
TOP2AP11388 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
TOP2AP11388 ALMS1-204ENST00000484298 12595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
TOP2AP11388 GAPDHP42-201ENST00000406848 981 ntBASIC10.18□□□□□ -0.78
TOP2AP11388 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC10.18□□□□□ -0.78
TOP2AP11388 RN7SL610P-201ENST00000463845 291 ntBASIC10.18□□□□□ -0.78
TOP2AP11388 AC087672.1-201ENST00000479876 766 ntBASIC10.18□□□□□ -0.78
TOP2AP11388 TPM3P3-201ENST00000521343 354 ntBASIC10.18□□□□□ -0.78
TOP2AP11388 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC10.18□□□□□ -0.78
TOP2AP11388 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC10.18□□□□□ -0.78
TOP2AP11388 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOP2AP11388 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC10.18□□□□□ -0.78
TOP2AP11388 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
TOP2AP11388 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TOP2AP11388 GPN1-203ENST00000424214 1725 ntTSL 2 BASIC10.18□□□□□ -0.78
TOP2AP11388 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC10.18□□□□□ -0.78
TOP2AP11388 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TOP2AP11388 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TOP2AP11388 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC10.17□□□□□ -0.78
TOP2AP11388 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 RN7SKP288-201ENST00000516227 268 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TOP2AP11388 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 AC019197.1-202ENST00000414885 2639 ntTSL 5 BASIC10.17□□□□□ -0.78
TOP2AP11388 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
TOP2AP11388 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 AC006213.6-201ENST00000623722 4179 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 GAPDHP24-201ENST00000328713 983 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
TOP2AP11388 HMGA1P8-201ENST00000414130 321 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC10.17□□□□□ -0.78
TOP2AP11388 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC10.17□□□□□ -0.78
TOP2AP11388 AC126177.5-201ENST00000549599 178 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 TAS2R6P-201ENST00000605022 826 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 RPSAP73-201ENST00000614820 330 ntBASIC10.17□□□□□ -0.78
TOP2AP11388 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TOP2AP11388 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC10.17□□□□□ -0.78
TOP2AP11388 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC10.16□□□□□ -0.78
TOP2AP11388 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TOP2AP11388 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TOP2AP11388 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
TOP2AP11388 SERBP1-203ENST00000370994 6676 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
TOP2AP11388 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC10.16□□□□□ -0.78
TOP2AP11388 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 U8.4-201ENST00000363626 134 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC10.16□□□□□ -0.78
TOP2AP11388 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC10.16□□□□□ -0.78
TOP2AP11388 OR6D1P-201ENST00000436165 939 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC10.16□□□□□ -0.78
TOP2AP11388 AC115223.1-201ENST00000466377 870 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 AC099521.1-201ENST00000482557 334 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 OR5M14P-201ENST00000506803 618 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 AC105384.2-201ENST00000508433 640 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC10.16□□□□□ -0.78
TOP2AP11388 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC10.16□□□□□ -0.78
TOP2AP11388 AC126615.2-201ENST00000553003 515 ntBASIC10.16□□□□□ -0.78
TOP2AP11388 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC10.16□□□□□ -0.78
TOP2AP11388 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
TOP2AP11388 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC10.16□□□□□ -0.78
TOP2AP11388 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
TOP2AP11388 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC10.16□□□□□ -0.78
TOP2AP11388 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC10.15□□□□□ -0.78
TOP2AP11388 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC10.15□□□□□ -0.78
TOP2AP11388 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
TOP2AP11388 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
TOP2AP11388 AC023141.8-201ENST00000442554 208 ntBASIC10.15□□□□□ -0.78
TOP2AP11388 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC10.15□□□□□ -0.78
TOP2AP11388 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC10.15□□□□□ -0.78
TOP2AP11388 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC10.15□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms