RNA–Protein interactions for RNA: ENST00000242994.3

NEUROD4-201, Transcript of neuronal differentiation 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEUROD4, Length 3,953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4-201ENST00000242994 NISCHQ9Y2I1 1504 aa13.39□□□□□ -0.27
NEUROD4-201ENST00000242994 DCAF8L2P0C7V8 631 aa13.07□□□□□ -0.32
NEUROD4-201ENST00000242994 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.36
NEUROD4-201ENST00000242994 SHROOM4Q9ULL8 1493 aa12.75□□□□□ -0.37
NEUROD4-201ENST00000242994 EHMT2Q96KQ7 1210 aa12.27□□□□□ -0.44
NEUROD4-201ENST00000242994 PCGF6Q9BYE7 350 aa12.03□□□□□ -0.48
NEUROD4-201ENST00000242994 FAM9AQ8IZU1 332 aaPredicted RBP12□□□□□ -0.49
NEUROD4-201ENST00000242994 TTBK1Q5TCY1 1321 aaPredicted RBP11.84□□□□□ -0.51
NEUROD4-201ENST00000242994 TRIM41Q8WV44 630 aa11.71□□□□□ -0.54
NEUROD4-201ENST00000242994 LOC105371045A0A1W2PR82 267 aa11.69□□□□□ -0.54
NEUROD4-201ENST00000242994 CHIC1Q5VXU3 224 aa11.68□□□□□ -0.54
NEUROD4-201ENST00000242994 PPARGC1BQ86YN6 1023 aaKnown RBP11.66□□□□□ -0.54
NEUROD4-201ENST00000242994 RANGAP1P46060 587 aaPredicted RBP11.6□□□□□ -0.55
NEUROD4-201ENST00000242994 HRCP23327 699 aa11.53□□□□□ -0.56
NEUROD4-201ENST00000242994 CCER1Q8TC90 406 aaPredicted RBP11.48□□□□□ -0.57
NEUROD4-201ENST00000242994 APLP2Q06481 763 aa11.47□□□□□ -0.57
NEUROD4-201ENST00000242994 UBTFP17480 764 aaKnown RBP11.43□□□□□ -0.58
NEUROD4-201ENST00000242994 TRIM26Q12899 539 aaPredicted RBP11.42□□□□□ -0.58
NEUROD4-201ENST00000242994 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
NEUROD4-201ENST00000242994 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
NEUROD4-201ENST00000242994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
NEUROD4-201ENST00000242994 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
NEUROD4-201ENST00000242994 ABCC9O60706 1549 aa11.23□□□□□ -0.61
NEUROD4-201ENST00000242994 CENPBP07199 599 aaPredicted RBP11.2□□□□□ -0.62
NEUROD4-201ENST00000242994 HNRNPUL2Q1KMD3 747 aaKnown RBP11.17□□□□□ -0.62
NEUROD4-201ENST00000242994 ZCCHC6Q5VYS8 1495 aaKnown RBP11.17□□□□□ -0.62
NEUROD4-201ENST00000242994 PABPN1Q86U42 306 aaKnown RBP eCLIP11.13□□□□□ -0.63
NEUROD4-201ENST00000242994 ITGAEP38570 1179 aa11.13□□□□□ -0.63
NEUROD4-201ENST00000242994 MYO15BQ96JP2 1530 aa11.13□□□□□ -0.63
NEUROD4-201ENST00000242994 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
NEUROD4-201ENST00000242994 SCRIBQ14160 1630 aa11□□□□□ -0.65
NEUROD4-201ENST00000242994 DIEXFQ68CQ4 756 aaKnown RBP10.99□□□□□ -0.65
NEUROD4-201ENST00000242994 CCDC180Q9P1Z9 1646 aa10.87□□□□□ -0.67
NEUROD4-201ENST00000242994 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
NEUROD4-201ENST00000242994 GTF3C3Q9Y5Q9 886 aa10.85□□□□□ -0.67
NEUROD4-201ENST00000242994 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
NEUROD4-201ENST00000242994 CSRNP3Q8WYN3 585 aa10.84□□□□□ -0.67
NEUROD4-201ENST00000242994 RSF1Q96T23 1441 aaPredicted RBP10.8□□□□□ -0.68
NEUROD4-201ENST00000242994 NEFLP07196 543 aa10.79□□□□□ -0.68
NEUROD4-201ENST00000242994 FAM50AQ14320 339 aaKnown RBP10.79□□□□□ -0.68
NEUROD4-201ENST00000242994 NEUROD1Q13562 356 aa10.76□□□□□ -0.69
NEUROD4-201ENST00000242994 POLR3GLQ9BT43 218 aa10.76□□□□□ -0.69
NEUROD4-201ENST00000242994 P3H3Q8IVL6 736 aa10.74□□□□□ -0.69
NEUROD4-201ENST00000242994 ZNF316A6NFI3 1004 aaPredicted RBP10.74□□□□□ -0.69
NEUROD4-201ENST00000242994 ACIN1Q9UKV3 1341 aaKnown RBP10.72□□□□□ -0.69
NEUROD4-201ENST00000242994 ERICH6Q7L0X2 663 aa10.71□□□□□ -0.69
NEUROD4-201ENST00000242994 BCANQ96GW7 911 aa10.69□□□□□ -0.7
NEUROD4-201ENST00000242994 SCAF1Q9H7N4 1312 aaKnown RBP10.66□□□□□ -0.7
NEUROD4-201ENST00000242994 CECR2Q9BXF3 1484 aa10.66□□□□□ -0.7
NEUROD4-201ENST00000242994 ARID3CA6NKF2 412 aa10.64□□□□□ -0.71
NEUROD4-201ENST00000242994 TRIM52Q96A61 297 aa10.59□□□□□ -0.71
NEUROD4-201ENST00000242994 RB1CC1Q8TDY2 1594 aa10.59□□□□□ -0.71
NEUROD4-201ENST00000242994 CEP162Q5TB80 1403 aa10.57□□□□□ -0.72
NEUROD4-201ENST00000242994 MIER1Q8N108 512 aa10.56□□□□□ -0.72
NEUROD4-201ENST00000242994 ZNF326Q5BKZ1 582 aaKnown RBP10.53□□□□□ -0.72
NEUROD4-201ENST00000242994 CLIP1P30622 1438 aa10.52□□□□□ -0.73
NEUROD4-201ENST00000242994 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.73
NEUROD4-201ENST00000242994 SOGA1O94964 1423 aa10.5□□□□□ -0.73
NEUROD4-201ENST00000242994 MROH2BQ7Z745 1585 aa10.5□□□□□ -0.73
NEUROD4-201ENST00000242994 MYT1LQ9UL68 1186 aa10.5□□□□□ -0.73
NEUROD4-201ENST00000242994 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
NEUROD4-201ENST00000242994 ANP32CO43423 234 aa10.48□□□□□ -0.73
NEUROD4-201ENST00000242994 FBLN2P98095 1184 aa10.48□□□□□ -0.73
NEUROD4-201ENST00000242994 WRNQ14191 1432 aaPredicted RBP eCLIP10.46□□□□□ -0.73
NEUROD4-201ENST00000242994 ABCC8Q09428 1581 aa10.46□□□□□ -0.74
NEUROD4-201ENST00000242994 MYT1Q01538 1121 aa10.44□□□□□ -0.74
NEUROD4-201ENST00000242994 NACADO15069 1562 aa10.44□□□□□ -0.74
NEUROD4-201ENST00000242994 GOLGA3Q08378 1498 aa10.43□□□□□ -0.74
NEUROD4-201ENST00000242994 CCDC88BA6NC98 1476 aa10.43□□□□□ -0.74
NEUROD4-201ENST00000242994 CHIC2Q9UKJ5 165 aa10.42□□□□□ -0.74
NEUROD4-201ENST00000242994 TNIKQ9UKE5 1360 aa10.42□□□□□ -0.74
NEUROD4-201ENST00000242994 FKBP8Q14318 412 aa10.4□□□□□ -0.75
NEUROD4-201ENST00000242994 ZNF777Q9ULD5 760 aaPredicted RBP10.39□□□□□ -0.75
NEUROD4-201ENST00000242994 BAZ1AQ9NRL2 1556 aaPredicted RBP10.39□□□□□ -0.75
NEUROD4-201ENST00000242994 WIZO95785 1651 aa10.38□□□□□ -0.75
NEUROD4-201ENST00000242994 TONSLQ96HA7 1378 aa10.36□□□□□ -0.75
NEUROD4-201ENST00000242994 EEA1Q15075 1411 aa10.36□□□□□ -0.75
NEUROD4-201ENST00000242994 BAZ1BQ9UIG0 1483 aaKnown RBP10.34□□□□□ -0.75
NEUROD4-201ENST00000242994 SLC4A1APQ9BWU0 796 aaKnown RBP10.34□□□□□ -0.75
NEUROD4-201ENST00000242994 HNRNPUQ00839 825 aaKnown RBP eCLIP10.34□□□□□ -0.75
NEUROD4-201ENST00000242994 CEP164Q9UPV0 1460 aa10.33□□□□□ -0.76
NEUROD4-201ENST00000242994 IRX6P78412 446 aaPredicted RBP10.32□□□□□ -0.76
NEUROD4-201ENST00000242994 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
NEUROD4-201ENST00000242994 SENP3-EIF4A1A0A087X0R7 540 aa10.32□□□□□ -0.76
NEUROD4-201ENST00000242994 FAM9BQ8IZU0 186 aa10.31□□□□□ -0.76
NEUROD4-201ENST00000242994 KANK4Q5T7N3 995 aaPredicted RBP10.3□□□□□ -0.76
NEUROD4-201ENST00000242994 RRP7BPQ9NSQ0 103 aa10.3□□□□□ -0.76
NEUROD4-201ENST00000242994 RUSC2Q8N2Y8 1516 aa10.3□□□□□ -0.76
NEUROD4-201ENST00000242994 MTUS2Q5JR59 1369 aa10.29□□□□□ -0.76
NEUROD4-201ENST00000242994 CDK11AQ9UQ88 783 aaPredicted RBP10.27□□□□□ -0.76
NEUROD4-201ENST00000242994 SALL2Q9Y467 1007 aaPredicted RBP10.27□□□□□ -0.77
NEUROD4-201ENST00000242994 DAXXQ9UER7 740 aaPredicted RBP10.25□□□□□ -0.77
NEUROD4-201ENST00000242994 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
NEUROD4-201ENST00000242994 VPS8Q8N3P4 1428 aa10.22□□□□□ -0.77
NEUROD4-201ENST00000242994 CLSPNQ9HAW4 1339 aa10.21□□□□□ -0.77
NEUROD4-201ENST00000242994 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
NEUROD4-201ENST00000242994 CCNB3Q8WWL7 1395 aa10.19□□□□□ -0.78
NEUROD4-201ENST00000242994 MRS2Q9HD23 443 aa10.19□□□□□ -0.78
NEUROD4-201ENST00000242994 RTL5Q5HYW3 569 aaPredicted RBP10.18□□□□□ -0.78
NEUROD4-201ENST00000242994 RAPGEF2Q9Y4G8 1499 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms