Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 U1.22-201ENST00000605806 164 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AL022238.3-201ENST00000609279 443 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AL031658.2-201ENST00000616850 651 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 MIR6730-201ENST00000622213 67 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 AC091953.4-201ENST00000625179 341 ntBASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 ERG-210ENST00000442448 5034 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CACNA2D4-222ENST00000587995 3883 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 MYO6-203ENST00000369981 8692 ntTSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 ZSCAN26-206ENST00000619937 2729 ntAPPRIS ALT1 TSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 FRMPD2-201ENST00000305531 4665 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 STAMBP-203ENST00000394073 6386 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 LINC01291-201ENST00000377469 3662 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CD200-202ENST00000383681 1997 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 SLC6A16-201ENST00000335875 2938 ntAPPRIS P2 TSL 5 BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 FAM13A-202ENST00000395002 4945 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 KALRN-201ENST00000240874 6537 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
COL25A1Q9BXS0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PARP9-202ENST00000462315 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LINC01572-201ENST00000561611 2194 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SLC13A3-210ENST00000472148 3283 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ZNF169-201ENST00000340911 2336 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PIGR-201ENST00000356495 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MAGOHB-201ENST00000320756 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TRIM51EP-201ENST00000524374 1516 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PALLD-206ENST00000505667 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 GLRA1-201ENST00000274576 1803 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MAGEB4-201ENST00000378982 2142 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 RNVU1-15-201ENST00000384476 165 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AGBL5-IT1-201ENST00000411862 339 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 RPL12P9-201ENST00000412942 488 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC004987.3-201ENST00000413879 771 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LINC00993-201ENST00000420453 540 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 Z99127.2-201ENST00000441426 334 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL161626.1-201ENST00000441480 490 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SEPT14P24-201ENST00000447236 180 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LAPTM4BP1-201ENST00000447781 690 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 USP9YP12-201ENST00000450481 570 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 NBPF2P-201ENST00000453025 661 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 MYL6P4-201ENST00000477911 453 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 NCOR1P1-202ENST00000486162 291 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL445187.1-201ENST00000502685 260 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC026427.2-201ENST00000506228 536 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 COX6B1P4-201ENST00000519826 484 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 IGHV7-40-201ENST00000520963 296 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 OR5AZ1P-201ENST00000527448 943 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 TRIM69-204ENST00000558329 1211 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC023968.1-201ENST00000560719 475 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 RN7SL622P-201ENST00000585292 275 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AP001429.1-201ENST00000602568 530 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL138895.2-201ENST00000603019 178 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC006006.1-201ENST00000603082 144 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AC011891.2-201ENST00000604949 397 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 AL135999.3-201ENST00000610501 812 ntBASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC7.74□□□□□ -1.17
COL25A1Q9BXS0 THAP12P3-201ENST00000456373 2266 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms