RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 NISCHQ9Y2I1 1504 aa18.16■□□□□ 0.5
LCA5-203ENST00000467898 PELP1Q8IZL8 1130 aaKnown RBP16.8■□□□□ 0.28
LCA5-203ENST00000467898 MYT1Q01538 1121 aa16.61■□□□□ 0.25
LCA5-203ENST00000467898 TTBK1Q5TCY1 1321 aaPredicted RBP16.02■□□□□ 0.16
LCA5-203ENST00000467898 CCDC180Q9P1Z9 1646 aa15.71■□□□□ 0.11
LCA5-203ENST00000467898 HRCP23327 699 aa15.5■□□□□ 0.07
LCA5-203ENST00000467898 ZCCHC6Q5VYS8 1495 aaKnown RBP15.33■□□□□ 0.04
LCA5-203ENST00000467898 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
LCA5-203ENST00000467898 ERICH6Q7L0X2 663 aa15.12■□□□□ 0.01
LCA5-203ENST00000467898 SCAF1Q9H7N4 1312 aaKnown RBP15.06■□□□□ 0
LCA5-203ENST00000467898 DCAF1Q9Y4B6 1507 aa15.01□□□□□ -0.01
LCA5-203ENST00000467898 APLP2Q06481 763 aa14.99□□□□□ -0.01
LCA5-203ENST00000467898 SHROOM4Q9ULL8 1493 aa14.97□□□□□ -0.01
LCA5-203ENST00000467898 BCL11AQ9H165 835 aa14.88□□□□□ -0.03
LCA5-203ENST00000467898 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
LCA5-203ENST00000467898 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
LCA5-203ENST00000467898 MYO15BQ96JP2 1530 aa14.71□□□□□ -0.05
LCA5-203ENST00000467898 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
LCA5-203ENST00000467898 CENPBP07199 599 aaPredicted RBP14.67□□□□□ -0.06
LCA5-203ENST00000467898 FAM9AQ8IZU1 332 aaPredicted RBP14.63□□□□□ -0.07
LCA5-203ENST00000467898 ABCC9O60706 1549 aa14.56□□□□□ -0.08
LCA5-203ENST00000467898 NACADO15069 1562 aa14.52□□□□□ -0.08
LCA5-203ENST00000467898 ACIN1Q9UKV3 1341 aaKnown RBP14.52□□□□□ -0.09
LCA5-203ENST00000467898 SUPT5HO00267 1087 aaKnown RBP14.5□□□□□ -0.09
LCA5-203ENST00000467898 SCRIBQ14160 1630 aa14.49□□□□□ -0.09
LCA5-203ENST00000467898 ZEB1P37275 1124 aaPredicted RBP14.45□□□□□ -0.1
LCA5-203ENST00000467898 PCGF6Q9BYE7 350 aa14.41□□□□□ -0.1
LCA5-203ENST00000467898 RB1CC1Q8TDY2 1594 aa14.32□□□□□ -0.12
LCA5-203ENST00000467898 ANP32EQ9BTT0 268 aa14.31□□□□□ -0.12
LCA5-203ENST00000467898 GTF3C3Q9Y5Q9 886 aa14.31□□□□□ -0.12
LCA5-203ENST00000467898 DAXXQ9UER7 740 aaPredicted RBP14.29□□□□□ -0.12
LCA5-203ENST00000467898 NEUROD1Q13562 356 aa14.26□□□□□ -0.13
LCA5-203ENST00000467898 RSF1Q96T23 1441 aaPredicted RBP14.19□□□□□ -0.14
LCA5-203ENST00000467898 UNC13AQ9UPW8 1703 aa14.19□□□□□ -0.14
LCA5-203ENST00000467898 CECR2Q9BXF3 1484 aa14.11□□□□□ -0.15
LCA5-203ENST00000467898 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
LCA5-203ENST00000467898 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
LCA5-203ENST00000467898 EIF5BO60841 1220 aaKnown RBP14.02□□□□□ -0.16
LCA5-203ENST00000467898 CSRNP3Q8WYN3 585 aa14□□□□□ -0.17
LCA5-203ENST00000467898 BICRAQ9NZM4 1560 aa13.99□□□□□ -0.17
LCA5-203ENST00000467898 WIZO95785 1651 aa13.99□□□□□ -0.17
LCA5-203ENST00000467898 TRIM26Q12899 539 aaPredicted RBP13.98□□□□□ -0.17
LCA5-203ENST00000467898 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
LCA5-203ENST00000467898 UBE2Q2Q8WVN8 375 aa13.95□□□□□ -0.18
LCA5-203ENST00000467898 SMARCA4P51532 1647 aa13.91□□□□□ -0.18
LCA5-203ENST00000467898 CLSPNQ9HAW4 1339 aa13.89□□□□□ -0.19
LCA5-203ENST00000467898 TOP2AP11388 1531 aaKnown RBP13.8□□□□□ -0.2
LCA5-203ENST00000467898 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
LCA5-203ENST00000467898 PABPN1Q86U42 306 aaKnown RBP eCLIP13.77□□□□□ -0.21
LCA5-203ENST00000467898 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
LCA5-203ENST00000467898 PEG3Q9GZU2 1588 aa13.74□□□□□ -0.21
LCA5-203ENST00000467898 ERICH6BQ5W0A0 696 aa13.72□□□□□ -0.21
LCA5-203ENST00000467898 SMARCA2P51531 1590 aa13.71□□□□□ -0.21
LCA5-203ENST00000467898 ANO8Q9HCE9 1232 aaPredicted RBP13.69□□□□□ -0.22
LCA5-203ENST00000467898 CCDC88BA6NC98 1476 aa13.67□□□□□ -0.22
LCA5-203ENST00000467898 TSHZ2Q9NRE2 1034 aa13.67□□□□□ -0.22
LCA5-203ENST00000467898 DIEXFQ68CQ4 756 aaKnown RBP13.66□□□□□ -0.22
LCA5-203ENST00000467898 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
LCA5-203ENST00000467898 TRIM41Q8WV44 630 aa13.58□□□□□ -0.23
LCA5-203ENST00000467898 LOC105371045A0A1W2PR82 267 aa13.56□□□□□ -0.24
LCA5-203ENST00000467898 PKNOX2Q96KN3 472 aa13.54□□□□□ -0.24
LCA5-203ENST00000467898 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
LCA5-203ENST00000467898 BAZ1BQ9UIG0 1483 aaKnown RBP13.49□□□□□ -0.25
LCA5-203ENST00000467898 PODXL2Q9NZ53 605 aa13.49□□□□□ -0.25
LCA5-203ENST00000467898 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
LCA5-203ENST00000467898 PLEKHG5O94827 1062 aa13.46□□□□□ -0.26
LCA5-203ENST00000467898 SALL2Q9Y467 1007 aaPredicted RBP13.43□□□□□ -0.26
LCA5-203ENST00000467898 HMGXB3Q12766 1538 aa13.43□□□□□ -0.26
LCA5-203ENST00000467898 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
LCA5-203ENST00000467898 SYNJ1O43426 1573 aa13.33□□□□□ -0.28
LCA5-203ENST00000467898 DEKP35659 375 aaKnown RBP13.31□□□□□ -0.28
LCA5-203ENST00000467898 WRNQ14191 1432 aaPredicted RBP eCLIP13.31□□□□□ -0.28
LCA5-203ENST00000467898 SOGA1O94964 1423 aa13.28□□□□□ -0.28
LCA5-203ENST00000467898 YTHDC1Q96MU7 727 aaKnown RBP13.27□□□□□ -0.28
LCA5-203ENST00000467898 NEFLP07196 543 aa13.27□□□□□ -0.29
LCA5-203ENST00000467898 FANCIQ9NVI1 1328 aa13.26□□□□□ -0.29
LCA5-203ENST00000467898 RUSC2Q8N2Y8 1516 aa13.25□□□□□ -0.29
LCA5-203ENST00000467898 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
LCA5-203ENST00000467898 RBM19Q9Y4C8 960 aaKnown RBP13.25□□□□□ -0.29
LCA5-203ENST00000467898 EEA1Q15075 1411 aa13.23□□□□□ -0.29
LCA5-203ENST00000467898 BIVM-ERCC5R4GMW8 1640 aa13.23□□□□□ -0.29
LCA5-203ENST00000467898 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
LCA5-203ENST00000467898 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
LCA5-203ENST00000467898 TOP2BQ02880 1626 aa13.22□□□□□ -0.29
LCA5-203ENST00000467898 PRDM2Q13029 1718 aa13.22□□□□□ -0.29
LCA5-203ENST00000467898 CFTRP13569 1480 aa13.2□□□□□ -0.3
LCA5-203ENST00000467898 EHMT2Q96KQ7 1210 aa13.18□□□□□ -0.3
LCA5-203ENST00000467898 MSH5O43196 834 aa13.17□□□□□ -0.3
LCA5-203ENST00000467898 GLIPR1L2Q4G1C9 344 aa13.17□□□□□ -0.3
LCA5-203ENST00000467898 CUX1P39880 1505 aa13.13□□□□□ -0.31
LCA5-203ENST00000467898 KIF21BO75037 1637 aa13.13□□□□□ -0.31
LCA5-203ENST00000467898 CCER1Q8TC90 406 aaPredicted RBP13.11□□□□□ -0.31
LCA5-203ENST00000467898 TNIKQ9UKE5 1360 aa13.11□□□□□ -0.31
LCA5-203ENST00000467898 MIER1Q8N108 512 aa13.11□□□□□ -0.31
LCA5-203ENST00000467898 GOLGA3Q08378 1498 aa13.09□□□□□ -0.31
LCA5-203ENST00000467898 NCBP3Q53F19 620 aaKnown RBP13.08□□□□□ -0.32
LCA5-203ENST00000467898 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
LCA5-203ENST00000467898 CEP164Q9UPV0 1460 aa13.06□□□□□ -0.32
LCA5-203ENST00000467898 CADPSQ9ULU8 1353 aa13.06□□□□□ -0.32
LCA5-203ENST00000467898 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms