RNA–Protein interactions for RNA: ENST00000413879.1

AC004987.3-201, humanhuman

BASIC

Gene AC004987.3, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004987.3-201ENST00000413879 AEBP2Q6ZN18 517 aaPredicted RBP23.33■■□□□ 1.33
AC004987.3-201ENST00000413879 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
AC004987.3-201ENST00000413879 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
AC004987.3-201ENST00000413879 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
AC004987.3-201ENST00000413879 FOXD1Q16676 465 aa18.66■□□□□ 0.58
AC004987.3-201ENST00000413879 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
AC004987.3-201ENST00000413879 MSH5O43196 834 aa17.6■□□□□ 0.41
AC004987.3-201ENST00000413879 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
AC004987.3-201ENST00000413879 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
AC004987.3-201ENST00000413879 PPP6R1Q9UPN7 881 aa17.23■□□□□ 0.35
AC004987.3-201ENST00000413879 ADRA2BP18089 450 aa17.2■□□□□ 0.34
AC004987.3-201ENST00000413879 MAPK8IP2Q13387 824 aaPredicted RBP15.89■□□□□ 0.13
AC004987.3-201ENST00000413879 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
AC004987.3-201ENST00000413879 DMRT2Q9Y5R5 561 aa15.78■□□□□ 0.12
AC004987.3-201ENST00000413879 CACNB1Q02641 598 aaPredicted RBP15.34■□□□□ 0.05
AC004987.3-201ENST00000413879 DCAF8L1A6NGE4 600 aa15.31■□□□□ 0.04
AC004987.3-201ENST00000413879 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
AC004987.3-201ENST00000413879 HOXD11P31277 338 aaPredicted RBP15.08■□□□□ 0
AC004987.3-201ENST00000413879 CNKSR2Q8WXI2 1034 aa15.02■□□□□ -0
AC004987.3-201ENST00000413879 RNF39Q9H2S5 420 aa14.95□□□□□ -0.02
AC004987.3-201ENST00000413879 RNF216Q9NWF9 866 aaPredicted RBP14.93□□□□□ -0.02
AC004987.3-201ENST00000413879 C1QBPQ07021 282 aaKnown RBP14.75□□□□□ -0.05
AC004987.3-201ENST00000413879 NCBP3Q53F19 620 aaKnown RBP14.62□□□□□ -0.07
AC004987.3-201ENST00000413879 DNAJC5BQ9UF47 199 aa14.6□□□□□ -0.07
AC004987.3-201ENST00000413879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.49□□□□□ -0.09
AC004987.3-201ENST00000413879 NPM3O75607 178 aaKnown RBP14.32□□□□□ -0.12
AC004987.3-201ENST00000413879 U3KPZ7 1027 aaPredicted RBP14.05□□□□□ -0.16
AC004987.3-201ENST00000413879 CAPN15O75808 1086 aa14.03□□□□□ -0.16
AC004987.3-201ENST00000413879 SPINK5Q9NQ38 1064 aaPredicted RBP13.97□□□□□ -0.17
AC004987.3-201ENST00000413879 DSG3P32926 999 aa13.93□□□□□ -0.18
AC004987.3-201ENST00000413879 KCNA4P22459 653 aa13.81□□□□□ -0.2
AC004987.3-201ENST00000413879 POTEHQ6S545 545 aa13.79□□□□□ -0.2
AC004987.3-201ENST00000413879 TRHP20396 242 aaPredicted RBP13.75□□□□□ -0.21
AC004987.3-201ENST00000413879 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
AC004987.3-201ENST00000413879 APLP2Q06481 763 aa13.72□□□□□ -0.21
AC004987.3-201ENST00000413879 ABCB7O75027 752 aa13.65□□□□□ -0.22
AC004987.3-201ENST00000413879 ZNF219Q9P2Y4 722 aaPredicted RBP13.65□□□□□ -0.22
AC004987.3-201ENST00000413879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.63□□□□□ -0.23
AC004987.3-201ENST00000413879 HNRNPUL2Q1KMD3 747 aaKnown RBP13.63□□□□□ -0.23
AC004987.3-201ENST00000413879 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
AC004987.3-201ENST00000413879 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
AC004987.3-201ENST00000413879 MYCNP04198 464 aaPredicted RBP13.28□□□□□ -0.28
AC004987.3-201ENST00000413879 POLA2Q14181 598 aa13.28□□□□□ -0.28
AC004987.3-201ENST00000413879 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
AC004987.3-201ENST00000413879 SLC4A1APQ9BWU0 796 aaKnown RBP13.02□□□□□ -0.33
AC004987.3-201ENST00000413879 FOXD4L1Q9NU39 408 aa12.98□□□□□ -0.33
AC004987.3-201ENST00000413879 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
AC004987.3-201ENST00000413879 AKT1S1Q96B36 256 aa12.96□□□□□ -0.33
AC004987.3-201ENST00000413879 ZBTB12Q9Y330 459 aaPredicted RBP12.96□□□□□ -0.33
AC004987.3-201ENST00000413879 REM2Q8IYK8 340 aaPredicted RBP12.84□□□□□ -0.35
AC004987.3-201ENST00000413879 OSCARQ8IYS5 282 aa12.81□□□□□ -0.36
AC004987.3-201ENST00000413879 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
AC004987.3-201ENST00000413879 PIP4P2Q8N4L2 257 aa12.75□□□□□ -0.37
AC004987.3-201ENST00000413879 HAX1O00165 279 aa12.7□□□□□ -0.38
AC004987.3-201ENST00000413879 PITPNM1O00562 1244 aa12.68□□□□□ -0.38
AC004987.3-201ENST00000413879 ZBTB22O15209 634 aa12.63□□□□□ -0.39
AC004987.3-201ENST00000413879 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
AC004987.3-201ENST00000413879 ATXN8OSP0DMR3 200 aa12.61□□□□□ -0.39
AC004987.3-201ENST00000413879 FBLN2P98095 1184 aa12.57□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE2BA6NHP3 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE6P0CI01 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 SPDYE2Q495Y8 402 aa12.53□□□□□ -0.4
AC004987.3-201ENST00000413879 CLEC11AQ9Y240 323 aa12.47□□□□□ -0.41
AC004987.3-201ENST00000413879 EVX2Q03828 476 aa12.41□□□□□ -0.42
AC004987.3-201ENST00000413879 PRKAR2AP13861 404 aaKnown RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 SPDYE1Q8NFV5 336 aaPredicted RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 ZNF692Q9BU19 519 aaPredicted RBP12.4□□□□□ -0.42
AC004987.3-201ENST00000413879 MKRN4PQ13434 485 aaPredicted RBP12.33□□□□□ -0.44
AC004987.3-201ENST00000413879 SSUH2Q9Y2M2 353 aa12.26□□□□□ -0.45
AC004987.3-201ENST00000413879 C19orf67A6NJJ6 358 aa12.22□□□□□ -0.45
AC004987.3-201ENST00000413879 PRR29P0C7W0 189 aa12.21□□□□□ -0.45
AC004987.3-201ENST00000413879 CHADLQ6NUI6 762 aa12.21□□□□□ -0.45
AC004987.3-201ENST00000413879 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
AC004987.3-201ENST00000413879 GABBR2O75899 941 aa12.15□□□□□ -0.46
AC004987.3-201ENST00000413879 LHX8Q68G74 356 aa12.03□□□□□ -0.48
AC004987.3-201ENST00000413879 CD44P16070 742 aaKnown RBP11.98□□□□□ -0.49
AC004987.3-201ENST00000413879 FARP1Q9Y4F1 1045 aaPredicted RBP11.97□□□□□ -0.49
AC004987.3-201ENST00000413879 CLCN6P51797 869 aa11.88□□□□□ -0.51
AC004987.3-201ENST00000413879 CSRNP3Q8WYN3 585 aa11.85□□□□□ -0.51
AC004987.3-201ENST00000413879 POTEIP0CG38 1075 aa11.84□□□□□ -0.51
AC004987.3-201ENST00000413879 DCBLD2Q96PD2 775 aa11.84□□□□□ -0.51
AC004987.3-201ENST00000413879 ZRANB1Q9UGI0 708 aa11.8□□□□□ -0.52
AC004987.3-201ENST00000413879 STAG3Q9UJ98 1225 aa11.8□□□□□ -0.52
AC004987.3-201ENST00000413879 CREBZFQ9NS37 354 aa11.74□□□□□ -0.53
AC004987.3-201ENST00000413879 ZNF579Q8NAF0 562 aaKnown RBP11.73□□□□□ -0.53
AC004987.3-201ENST00000413879 SPDYE4A6NLX3 237 aa11.69□□□□□ -0.54
AC004987.3-201ENST00000413879 PAK3O75914 559 aaPredicted RBP11.68□□□□□ -0.54
AC004987.3-201ENST00000413879 GALR2O43603 387 aaPredicted RBP11.63□□□□□ -0.55
AC004987.3-201ENST00000413879 NPM1P06748 294 aaKnown RBP eCLIP11.61□□□□□ -0.55
AC004987.3-201ENST00000413879 EHMT2Q96KQ7 1210 aa11.61□□□□□ -0.55
AC004987.3-201ENST00000413879 PHF12Q96QT6 1004 aa11.57□□□□□ -0.56
AC004987.3-201ENST00000413879 PLSCR2Q9NRY7 297 aa11.55□□□□□ -0.56
AC004987.3-201ENST00000413879 OTUD5Q96G74 571 aa11.49□□□□□ -0.57
AC004987.3-201ENST00000413879 POTEB2H3BUK9 544 aa11.46□□□□□ -0.57
AC004987.3-201ENST00000413879 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
AC004987.3-201ENST00000413879 PELP1Q8IZL8 1130 aaKnown RBP11.42□□□□□ -0.58
AC004987.3-201ENST00000413879 TSPYL2Q9H2G4 693 aaPredicted RBP11.39□□□□□ -0.59
AC004987.3-201ENST00000413879 MS4A3Q96HJ5 214 aa11.38□□□□□ -0.59
AC004987.3-201ENST00000413879 METRNQ9UJH8 293 aa11.36□□□□□ -0.59
AC004987.3-201ENST00000413879 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms