Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 RN7SL714P-201ENST00000487050 298 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC117395.1-201ENST00000487390 403 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RN7SL561P-201ENST00000488553 281 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RNU6-760P-201ENST00000516078 97 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 IGKV3D-25-201ENST00000519599 235 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC073111.2-201ENST00000605657 1075 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC025171.4-201ENST00000607250 1047 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC004801.6-201ENST00000616571 978 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC073862.4-201ENST00000622982 854 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AL354854.1-201ENST00000455940 1363 ntBASIC6.43□□□□□ -1.38
HMGB4Q8WW32 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
HMGB4Q8WW32 AC007993.1-201ENST00000621298 2430 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL359195.2-201ENST00000623657 4412 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RNU1-46P-201ENST00000384425 164 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 MIR541-201ENST00000401360 84 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 LYPLA1P3-201ENST00000402650 695 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 GLS-203ENST00000409215 632 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RN7SKP144-201ENST00000411108 279 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RPS6P14-201ENST00000425165 719 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RPL34P27-201ENST00000428810 349 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 SDR42E1P3-201ENST00000438345 502 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL590004.3-202ENST00000445883 451 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 OR4D12P-201ENST00000509361 911 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RN7SKP238-201ENST00000516483 249 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 OR7E10P-201ENST00000526420 991 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC073333.2-201ENST00000603589 769 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL391262.2-201ENST00000622466 494 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL356490.1-201ENST00000623079 479 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AL138960.2-201ENST00000625145 535 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC119674.1-220ENST00000641502 1048 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 EIF3EP1-201ENST00000433978 1316 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 AC006600.2-201ENST00000624834 2506 ntBASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
HMGB4Q8WW32 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 MTCO1P28-201ENST00000574177 1528 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 AC023490.2-201ENST00000359859 470 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 RNA5SP346-201ENST00000363541 121 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 RNU6-1331P-201ENST00000363658 106 ntBASIC6.41□□□□□ -1.38
HMGB4Q8WW32 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.41□□□□□ -1.38
HMGB4Q8WW32 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms