RNA–Protein interactions for RNA: ENST00000411108.1

RN7SKP144-201, Transcript of RNA, 7SK small nuclear pseudogene 144, humanhuman

BASIC

Gene RN7SKP144, Length 279 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP144-201ENST00000411108 AEBP2Q6ZN18 517 aaPredicted RBP18.8■□□□□ 0.6
RN7SKP144-201ENST00000411108 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
RN7SKP144-201ENST00000411108 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
RN7SKP144-201ENST00000411108 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
RN7SKP144-201ENST00000411108 NISCHQ9Y2I1 1504 aa14.99□□□□□ -0.01
RN7SKP144-201ENST00000411108 FOXD1Q16676 465 aa14.87□□□□□ -0.03
RN7SKP144-201ENST00000411108 PLPPR3Q6T4P5 718 aa14.55□□□□□ -0.08
RN7SKP144-201ENST00000411108 ABCC9O60706 1549 aa14.16□□□□□ -0.14
RN7SKP144-201ENST00000411108 PPP6R1Q9UPN7 881 aa14.13□□□□□ -0.15
RN7SKP144-201ENST00000411108 ADRA2BP18089 450 aa14.11□□□□□ -0.15
RN7SKP144-201ENST00000411108 PIAS4Q8N2W9 510 aaPredicted RBP13.98□□□□□ -0.17
RN7SKP144-201ENST00000411108 MSH5O43196 834 aa13.77□□□□□ -0.21
RN7SKP144-201ENST00000411108 CCDC180Q9P1Z9 1646 aa13.75□□□□□ -0.21
RN7SKP144-201ENST00000411108 DNAJC5BQ9UF47 199 aa13.7□□□□□ -0.22
RN7SKP144-201ENST00000411108 RB1CC1Q8TDY2 1594 aa13.3□□□□□ -0.28
RN7SKP144-201ENST00000411108 UNC13AQ9UPW8 1703 aa13.13□□□□□ -0.31
RN7SKP144-201ENST00000411108 NACADO15069 1562 aa13.07□□□□□ -0.32
RN7SKP144-201ENST00000411108 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
RN7SKP144-201ENST00000411108 POTEDQ86YR6 584 aa13.05□□□□□ -0.32
RN7SKP144-201ENST00000411108 DNAJC5Q9H3Z4 198 aa12.97□□□□□ -0.33
RN7SKP144-201ENST00000411108 BICRAQ9NZM4 1560 aa12.92□□□□□ -0.34
RN7SKP144-201ENST00000411108 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
RN7SKP144-201ENST00000411108 DCAF8L2P0C7V8 631 aa12.86□□□□□ -0.35
RN7SKP144-201ENST00000411108 SCAF1Q9H7N4 1312 aaKnown RBP12.84□□□□□ -0.35
RN7SKP144-201ENST00000411108 PPP4R3CPQ6ZMV5 832 aa12.82□□□□□ -0.36
RN7SKP144-201ENST00000411108 CC2D2AQ9P2K1 1620 aa12.81□□□□□ -0.36
RN7SKP144-201ENST00000411108 CECR2Q9BXF3 1484 aa12.81□□□□□ -0.36
RN7SKP144-201ENST00000411108 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
RN7SKP144-201ENST00000411108 DMRT2Q9Y5R5 561 aa12.69□□□□□ -0.38
RN7SKP144-201ENST00000411108 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
RN7SKP144-201ENST00000411108 EIF4G1Q04637 1599 aaKnown RBP12.64□□□□□ -0.39
RN7SKP144-201ENST00000411108 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
RN7SKP144-201ENST00000411108 SCRIBQ14160 1630 aa12.45□□□□□ -0.42
RN7SKP144-201ENST00000411108 CUX2O14529 1486 aa12.42□□□□□ -0.42
RN7SKP144-201ENST00000411108 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
RN7SKP144-201ENST00000411108 DCAF1Q9Y4B6 1507 aa12.35□□□□□ -0.43
RN7SKP144-201ENST00000411108 HOXD11P31277 338 aaPredicted RBP12.32□□□□□ -0.44
RN7SKP144-201ENST00000411108 ZCCHC6Q5VYS8 1495 aaKnown RBP12.3□□□□□ -0.44
RN7SKP144-201ENST00000411108 RNF216Q9NWF9 866 aaPredicted RBP12.3□□□□□ -0.44
RN7SKP144-201ENST00000411108 ERCC6Q03468 1493 aa12.27□□□□□ -0.45
RN7SKP144-201ENST00000411108 KCNA4P22459 653 aa12.25□□□□□ -0.45
RN7SKP144-201ENST00000411108 DCAF8L1A6NGE4 600 aa12.24□□□□□ -0.45
RN7SKP144-201ENST00000411108 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
RN7SKP144-201ENST00000411108 TRIM41Q8WV44 630 aa12.2□□□□□ -0.46
RN7SKP144-201ENST00000411108 THOC2Q8NI27 1593 aaKnown RBP12.05□□□□□ -0.48
RN7SKP144-201ENST00000411108 NCAPD3P42695 1498 aa12.03□□□□□ -0.48
RN7SKP144-201ENST00000411108 NESP48681 1621 aa12.03□□□□□ -0.48
RN7SKP144-201ENST00000411108 KIF21AQ7Z4S6 1674 aa11.95□□□□□ -0.5
RN7SKP144-201ENST00000411108 HMGXB3Q12766 1538 aa11.93□□□□□ -0.5
RN7SKP144-201ENST00000411108 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
RN7SKP144-201ENST00000411108 SMARCA2P51531 1590 aa11.92□□□□□ -0.5
RN7SKP144-201ENST00000411108 LAMC3Q9Y6N6 1575 aa11.89□□□□□ -0.51
RN7SKP144-201ENST00000411108 BAZ1AQ9NRL2 1556 aaPredicted RBP11.84□□□□□ -0.51
RN7SKP144-201ENST00000411108 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
RN7SKP144-201ENST00000411108 BAZ1BQ9UIG0 1483 aaKnown RBP11.8□□□□□ -0.52
RN7SKP144-201ENST00000411108 PDS5BQ9NTI5 1447 aa11.79□□□□□ -0.52
RN7SKP144-201ENST00000411108 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
RN7SKP144-201ENST00000411108 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.78□□□□□ -0.52
RN7SKP144-201ENST00000411108 OSCARQ8IYS5 282 aa11.76□□□□□ -0.53
RN7SKP144-201ENST00000411108 WDR62O43379 1518 aa11.73□□□□□ -0.53
RN7SKP144-201ENST00000411108 MRC2Q9UBG0 1479 aa11.73□□□□□ -0.53
RN7SKP144-201ENST00000411108 RIMBP3CA6NJZ7 1639 aa11.72□□□□□ -0.53
RN7SKP144-201ENST00000411108 RIMBP3BA6NNM3 1639 aa11.72□□□□□ -0.53
RN7SKP144-201ENST00000411108 RIMBP3Q9UFD9 1639 aa11.72□□□□□ -0.53
RN7SKP144-201ENST00000411108 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP144-201ENST00000411108 PEG3Q9GZU2 1588 aa11.71□□□□□ -0.54
RN7SKP144-201ENST00000411108 CADPSQ9ULU8 1353 aa11.64□□□□□ -0.55
RN7SKP144-201ENST00000411108 SLC4A2P04920 1241 aa11.61□□□□□ -0.55
RN7SKP144-201ENST00000411108 C1QBPQ07021 282 aaKnown RBP11.61□□□□□ -0.55
RN7SKP144-201ENST00000411108 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
RN7SKP144-201ENST00000411108 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
RN7SKP144-201ENST00000411108 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
RN7SKP144-201ENST00000411108 U3KPZ7 1027 aaPredicted RBP11.56□□□□□ -0.56
RN7SKP144-201ENST00000411108 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
RN7SKP144-201ENST00000411108 MROH2BQ7Z745 1585 aa11.54□□□□□ -0.56
RN7SKP144-201ENST00000411108 FANCD2Q9BXW9 1451 aa11.52□□□□□ -0.56
RN7SKP144-201ENST00000411108 CYB5RLQ6IPT4 315 aa11.52□□□□□ -0.57
RN7SKP144-201ENST00000411108 URB2Q14146 1524 aaKnown RBP11.46□□□□□ -0.57
RN7SKP144-201ENST00000411108 CHD1O14646 1710 aa11.44□□□□□ -0.58
RN7SKP144-201ENST00000411108 PRDM2Q13029 1718 aa11.44□□□□□ -0.58
RN7SKP144-201ENST00000411108 WIZO95785 1651 aa11.44□□□□□ -0.58
RN7SKP144-201ENST00000411108 ARAP1Q96P48 1450 aa11.43□□□□□ -0.58
RN7SKP144-201ENST00000411108 CFTRP13569 1480 aa11.4□□□□□ -0.58
RN7SKP144-201ENST00000411108 ZNF608Q9ULD9 1512 aaPredicted RBP11.4□□□□□ -0.59
RN7SKP144-201ENST00000411108 IFT140Q96RY7 1462 aa11.37□□□□□ -0.59
RN7SKP144-201ENST00000411108 EIF4G3O43432 1585 aaKnown RBP11.35□□□□□ -0.59
RN7SKP144-201ENST00000411108 SPINK5Q9NQ38 1064 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP144-201ENST00000411108 RSF1Q96T23 1441 aaPredicted RBP11.34□□□□□ -0.59
RN7SKP144-201ENST00000411108 CAPN15O75808 1086 aa11.3□□□□□ -0.6
RN7SKP144-201ENST00000411108 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
RN7SKP144-201ENST00000411108 MYCNP04198 464 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP144-201ENST00000411108 ZBTB22O15209 634 aa11.27□□□□□ -0.61
RN7SKP144-201ENST00000411108 TOPBP1Q92547 1522 aa11.26□□□□□ -0.61
RN7SKP144-201ENST00000411108 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP144-201ENST00000411108 FBLN2P98095 1184 aa11.26□□□□□ -0.61
RN7SKP144-201ENST00000411108 HNRNPUL2Q1KMD3 747 aaKnown RBP11.26□□□□□ -0.61
RN7SKP144-201ENST00000411108 AQRO60306 1485 aaKnown RBP eCLIP11.23□□□□□ -0.61
RN7SKP144-201ENST00000411108 TARBP1Q13395 1621 aaKnown RBP11.23□□□□□ -0.61
RN7SKP144-201ENST00000411108 SAMD1Q6SPF0 538 aaPredicted RBP11.22□□□□□ -0.61
RN7SKP144-201ENST00000411108 ABCC8Q09428 1581 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms