RNA–Protein interactions for RNA: ENST00000474696.5

ARPP21-231, Transcript of cAMP regulated phosphoprotein 21, human

TSL 2 BASIC

Gene ARPP21, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARPP21-231	ENST00000474696	CHIC1	Q5VXU3	224 aa		16.58	■□□□□ 0.24
ARPP21-231	ENST00000474696	AEBP2	Q6ZN18	517 aa	Predicted RBP	16.09	■□□□□ 0.17
ARPP21-231	ENST00000474696	NISCH	Q9Y2I1	1504 aa		14.77	□□□□□ -0.04
ARPP21-231	ENST00000474696	PHF23	Q9BUL5	403 aa	Predicted RBP	14.72	□□□□□ -0.05
ARPP21-231	ENST00000474696	PLPPR3	Q6T4P5	718 aa		13.84	□□□□□ -0.19
ARPP21-231	ENST00000474696	SENP3	Q9H4L4	574 aa	Predicted RBP	13.41	□□□□□ -0.26
ARPP21-231	ENST00000474696	EHMT2	Q96KQ7	1210 aa		13.38	□□□□□ -0.27
ARPP21-231	ENST00000474696	ABCC9	O60706	1549 aa		13.29	□□□□□ -0.28
ARPP21-231	ENST00000474696	CCDC180	Q9P1Z9	1646 aa		13.28	□□□□□ -0.28
ARPP21-231	ENST00000474696	KCNA4	P22459	653 aa		13.15	□□□□□ -0.3
ARPP21-231	ENST00000474696	ADRA2B	P18089	450 aa		12.98	□□□□□ -0.33
ARPP21-231	ENST00000474696	CSRNP3	Q8WYN3	585 aa		12.83	□□□□□ -0.36
ARPP21-231	ENST00000474696	RB1CC1	Q8TDY2	1594 aa		12.69	□□□□□ -0.38
ARPP21-231	ENST00000474696	DCAF8L2	P0C7V8	631 aa		12.68	□□□□□ -0.38
ARPP21-231	ENST00000474696	PPP6R1	Q9UPN7	881 aa		12.66	□□□□□ -0.38
ARPP21-231	ENST00000474696	SLC4A1AP	Q9BWU0	796 aa	Known RBP	12.65	□□□□□ -0.38
ARPP21-231	ENST00000474696	NACAD	O15069	1562 aa		12.58	□□□□□ -0.4
ARPP21-231	ENST00000474696	SLC24A1	O60721	1099 aa		12.52	□□□□□ -0.41
ARPP21-231	ENST00000474696	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.39	□□□□□ -0.43
ARPP21-231	ENST00000474696	FOXD1	Q16676	465 aa		12.38	□□□□□ -0.43
ARPP21-231	ENST00000474696	MYO15B	Q96JP2	1530 aa		12.36	□□□□□ -0.43
ARPP21-231	ENST00000474696	DNAJC5B	Q9UF47	199 aa		12.35	□□□□□ -0.43
ARPP21-231	ENST00000474696	PPP4R3CP	Q6ZMV5	832 aa		12.33	□□□□□ -0.44
ARPP21-231	ENST00000474696	UNC13A	Q9UPW8	1703 aa		12.26	□□□□□ -0.45
ARPP21-231	ENST00000474696	ZCCHC6	Q5VYS8	1495 aa	Known RBP	12.22	□□□□□ -0.45
ARPP21-231	ENST00000474696	NCBP3	Q53F19	620 aa	Known RBP	12.22	□□□□□ -0.45
ARPP21-231	ENST00000474696	DCAF1	Q9Y4B6	1507 aa		12.2	□□□□□ -0.46
ARPP21-231	ENST00000474696	RTN4	Q9NQC3	1192 aa	Known RBP	12.19	□□□□□ -0.46
ARPP21-231	ENST00000474696	ZBTB22	O15209	634 aa		12.18	□□□□□ -0.46
ARPP21-231	ENST00000474696	BICRA	Q9NZM4	1560 aa		12.17	□□□□□ -0.46
ARPP21-231	ENST00000474696	NPM3	O75607	178 aa	Known RBP	12.14	□□□□□ -0.47
ARPP21-231	ENST00000474696	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.13	□□□□□ -0.47
ARPP21-231	ENST00000474696	SHROOM4	Q9ULL8	1493 aa		12.13	□□□□□ -0.47
ARPP21-231	ENST00000474696	SCRIB	Q14160	1630 aa		12.11	□□□□□ -0.47
ARPP21-231	ENST00000474696	CECR2	Q9BXF3	1484 aa		11.98	□□□□□ -0.49
ARPP21-231	ENST00000474696	CC2D2A	Q9P2K1	1620 aa		11.97	□□□□□ -0.49
ARPP21-231	ENST00000474696	EIF4G1	Q04637	1599 aa	Known RBP	11.95	□□□□□ -0.5
ARPP21-231	ENST00000474696	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.87	□□□□□ -0.51
ARPP21-231	ENST00000474696	FOXD4L1	Q9NU39	408 aa		11.8	□□□□□ -0.52
ARPP21-231	ENST00000474696	CNKSR2	Q8WXI2	1034 aa		11.76	□□□□□ -0.53
ARPP21-231	ENST00000474696	NCAPD3	P42695	1498 aa		11.57	□□□□□ -0.56
ARPP21-231	ENST00000474696	ERCC6	Q03468	1493 aa		11.57	□□□□□ -0.56
ARPP21-231	ENST00000474696	SMARCA2	P51531	1590 aa		11.57	□□□□□ -0.56
ARPP21-231	ENST00000474696	ATAD2B	Q9ULI0	1458 aa		11.53	□□□□□ -0.56
ARPP21-231	ENST00000474696	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.53	□□□□□ -0.56
ARPP21-231	ENST00000474696	SMARCA4	P51532	1647 aa		11.53	□□□□□ -0.56
ARPP21-231	ENST00000474696	FKBP8	Q14318	412 aa		11.5	□□□□□ -0.57
ARPP21-231	ENST00000474696	SCAF1	Q9H7N4	1312 aa	Known RBP	11.5	□□□□□ -0.57
ARPP21-231	ENST00000474696	BAZ1B	Q9UIG0	1483 aa	Known RBP	11.5	□□□□□ -0.57
ARPP21-231	ENST00000474696	HMGXB3	Q12766	1538 aa		11.5	□□□□□ -0.57
ARPP21-231	ENST00000474696	CUX2	O14529	1486 aa		11.48	□□□□□ -0.57
ARPP21-231	ENST00000474696	DNAJC5	Q9H3Z4	198 aa		11.45	□□□□□ -0.58
ARPP21-231	ENST00000474696	PEG3	Q9GZU2	1588 aa		11.38	□□□□□ -0.59
ARPP21-231	ENST00000474696	NES	P48681	1621 aa		11.36	□□□□□ -0.59
ARPP21-231	ENST00000474696	LAMC3	Q9Y6N6	1575 aa		11.36	□□□□□ -0.59
ARPP21-231	ENST00000474696	PDS5B	Q9NTI5	1447 aa		11.35	□□□□□ -0.59
ARPP21-231	ENST00000474696	MROH2B	Q7Z745	1585 aa		11.35	□□□□□ -0.59
ARPP21-231	ENST00000474696	RNF216	Q9NWF9	866 aa	Predicted RBP	11.31	□□□□□ -0.6
ARPP21-231	ENST00000474696	ATXN8OS	P0DMR3	200 aa		11.3	□□□□□ -0.6
ARPP21-231	ENST00000474696	CADPS	Q9ULU8	1353 aa		11.26	□□□□□ -0.61
ARPP21-231	ENST00000474696	SLC4A2	P04920	1241 aa		11.25	□□□□□ -0.61
ARPP21-231	ENST00000474696	WIZ	O95785	1651 aa		11.24	□□□□□ -0.61
ARPP21-231	ENST00000474696	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.23	□□□□□ -0.61
ARPP21-231	ENST00000474696	THOC2	Q8NI27	1593 aa	Known RBP	11.23	□□□□□ -0.61
ARPP21-231	ENST00000474696	KIF21A	Q7Z4S6	1674 aa		11.23	□□□□□ -0.61
ARPP21-231	ENST00000474696	MRC2	Q9UBG0	1479 aa		11.19	□□□□□ -0.62
ARPP21-231	ENST00000474696	CEP164	Q9UPV0	1460 aa		11.18	□□□□□ -0.62
ARPP21-231	ENST00000474696	MYCN	P04198	464 aa	Predicted RBP	11.16	□□□□□ -0.62
ARPP21-231	ENST00000474696	PLCB2	Q00722	1185 aa		11.15	□□□□□ -0.62
ARPP21-231	ENST00000474696	RSF1	Q96T23	1441 aa	Predicted RBP	11.14	□□□□□ -0.63
ARPP21-231	ENST00000474696	FANCD2	Q9BXW9	1451 aa		11.13	□□□□□ -0.63
ARPP21-231	ENST00000474696	TOP2A	P11388	1531 aa	Known RBP	11.13	□□□□□ -0.63
ARPP21-231	ENST00000474696	WDR62	O43379	1518 aa		11.11	□□□□□ -0.63
ARPP21-231	ENST00000474696	CFTR	P13569	1480 aa		11.09	□□□□□ -0.63
ARPP21-231	ENST00000474696	HOXD11	P31277	338 aa	Predicted RBP	11.05	□□□□□ -0.64
ARPP21-231	ENST00000474696	TRIM41	Q8WV44	630 aa		11.05	□□□□□ -0.64
ARPP21-231	ENST00000474696	PRKCSH	P14314	528 aa	Predicted RBP	11.04	□□□□□ -0.64
ARPP21-231	ENST00000474696	OSCAR	Q8IYS5	282 aa		11.03	□□□□□ -0.64
ARPP21-231	ENST00000474696	BCAN	Q96GW7	911 aa		11.01	□□□□□ -0.65
ARPP21-231	ENST00000474696	PRDM2	Q13029	1718 aa		11	□□□□□ -0.65
ARPP21-231	ENST00000474696	CCDC88B	A6NC98	1476 aa		10.99	□□□□□ -0.65
ARPP21-231	ENST00000474696	MSH5	O43196	834 aa		10.98	□□□□□ -0.65
ARPP21-231	ENST00000474696	URB2	Q14146	1524 aa	Known RBP	10.98	□□□□□ -0.65
ARPP21-231	ENST00000474696	HAP1	P54257	671 aa	Predicted RBP	10.97	□□□□□ -0.65
ARPP21-231	ENST00000474696	ABCC8	Q09428	1581 aa		10.97	□□□□□ -0.65
ARPP21-231	ENST00000474696	TAOK2	Q9UL54	1235 aa		10.96	□□□□□ -0.65
ARPP21-231	ENST00000474696	IFT140	Q96RY7	1462 aa		10.94	□□□□□ -0.66
ARPP21-231	ENST00000474696	TOPBP1	Q92547	1522 aa		10.89	□□□□□ -0.67
ARPP21-231	ENST00000474696	DMRT2	Q9Y5R5	561 aa		10.89	□□□□□ -0.67
ARPP21-231	ENST00000474696	DNMBP	Q6XZF7	1577 aa		10.87	□□□□□ -0.67
ARPP21-231	ENST00000474696	FBLN2	P98095	1184 aa		10.87	□□□□□ -0.67
ARPP21-231	ENST00000474696	ATF5	Q9Y2D1	282 aa	Predicted RBP	10.85	□□□□□ -0.67
ARPP21-231	ENST00000474696	ZNF608	Q9ULD9	1512 aa	Predicted RBP	10.84	□□□□□ -0.67
ARPP21-231	ENST00000474696	VSIG10	Q8N0Z9	540 aa		10.83	□□□□□ -0.68
ARPP21-231	ENST00000474696	EIF4G3	O43432	1585 aa	Known RBP	10.82	□□□□□ -0.68
ARPP21-231	ENST00000474696	SUPT5H	O00267	1087 aa	Known RBP	10.81	□□□□□ -0.68
ARPP21-231	ENST00000474696	SOGA1	O94964	1423 aa		10.8	□□□□□ -0.68
ARPP21-231	ENST00000474696	AQR	O60306	1485 aa	Known RBP eCLIP	10.79	□□□□□ -0.68
ARPP21-231	ENST00000474696	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.78	□□□□□ -0.68
ARPP21-231	ENST00000474696	POLA1	P09884	1462 aa	Predicted RBP	10.77	□□□□□ -0.69

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