RNA–Protein interactions for RNA: ENST00000515667.5

CLNK-204, Transcript of cytokine dependent hematopoietic cell linker, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CLNK, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNK-204ENST00000515667 CHIC1Q5VXU3 224 aa15.43■□□□□ 0.06
CLNK-204ENST00000515667 AEBP2Q6ZN18 517 aaPredicted RBP15.07■□□□□ 0
CLNK-204ENST00000515667 NISCHQ9Y2I1 1504 aa15.05■□□□□ 0
CLNK-204ENST00000515667 PHF23Q9BUL5 403 aaPredicted RBP13.57□□□□□ -0.24
CLNK-204ENST00000515667 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
CLNK-204ENST00000515667 CCDC180Q9P1Z9 1646 aa13□□□□□ -0.33
CLNK-204ENST00000515667 PLPPR3Q6T4P5 718 aa12.97□□□□□ -0.33
CLNK-204ENST00000515667 SENP3Q9H4L4 574 aaPredicted RBP12.83□□□□□ -0.36
CLNK-204ENST00000515667 EHMT2Q96KQ7 1210 aa12.79□□□□□ -0.36
CLNK-204ENST00000515667 ZCCHC6Q5VYS8 1495 aaKnown RBP12.74□□□□□ -0.37
CLNK-204ENST00000515667 DCAF1Q9Y4B6 1507 aa12.48□□□□□ -0.41
CLNK-204ENST00000515667 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
CLNK-204ENST00000515667 MYO15BQ96JP2 1530 aa12.2□□□□□ -0.46
CLNK-204ENST00000515667 DCAF8L2P0C7V8 631 aa12.14□□□□□ -0.47
CLNK-204ENST00000515667 ADRA2BP18089 450 aa12.13□□□□□ -0.47
CLNK-204ENST00000515667 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
CLNK-204ENST00000515667 KCNA4P22459 653 aa12.08□□□□□ -0.48
CLNK-204ENST00000515667 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
CLNK-204ENST00000515667 ABCC9O60706 1549 aa12□□□□□ -0.49
CLNK-204ENST00000515667 NACADO15069 1562 aa11.99□□□□□ -0.49
CLNK-204ENST00000515667 SCRIBQ14160 1630 aa11.96□□□□□ -0.5
CLNK-204ENST00000515667 PPP6R1Q9UPN7 881 aa11.86□□□□□ -0.51
CLNK-204ENST00000515667 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
CLNK-204ENST00000515667 RB1CC1Q8TDY2 1594 aa11.79□□□□□ -0.52
CLNK-204ENST00000515667 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
CLNK-204ENST00000515667 FOXD1Q16676 465 aa11.77□□□□□ -0.53
CLNK-204ENST00000515667 DAXXQ9UER7 740 aaPredicted RBP11.76□□□□□ -0.53
CLNK-204ENST00000515667 SLC4A1APQ9BWU0 796 aaKnown RBP11.73□□□□□ -0.53
CLNK-204ENST00000515667 CECR2Q9BXF3 1484 aa11.66□□□□□ -0.54
CLNK-204ENST00000515667 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.55
CLNK-204ENST00000515667 UNC13AQ9UPW8 1703 aa11.64□□□□□ -0.55
CLNK-204ENST00000515667 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
CLNK-204ENST00000515667 WIZO95785 1651 aa11.57□□□□□ -0.56
CLNK-204ENST00000515667 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
CLNK-204ENST00000515667 NCBP3Q53F19 620 aaKnown RBP11.53□□□□□ -0.56
CLNK-204ENST00000515667 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
CLNK-204ENST00000515667 SMARCA4P51532 1647 aa11.51□□□□□ -0.57
CLNK-204ENST00000515667 PIAS4Q8N2W9 510 aaPredicted RBP11.5□□□□□ -0.57
CLNK-204ENST00000515667 EIF4G1Q04637 1599 aaKnown RBP11.5□□□□□ -0.57
CLNK-204ENST00000515667 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
CLNK-204ENST00000515667 TOP2AP11388 1531 aaKnown RBP11.46□□□□□ -0.57
CLNK-204ENST00000515667 AMER1Q5JTC6 1135 aaPredicted RBP11.41□□□□□ -0.58
CLNK-204ENST00000515667 PEG3Q9GZU2 1588 aa11.38□□□□□ -0.59
CLNK-204ENST00000515667 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
CLNK-204ENST00000515667 LOC105371045A0A1W2PR82 267 aa11.36□□□□□ -0.59
CLNK-204ENST00000515667 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
CLNK-204ENST00000515667 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
CLNK-204ENST00000515667 TIMELESSQ9UNS1 1208 aa11.31□□□□□ -0.6
CLNK-204ENST00000515667 ERICH6Q7L0X2 663 aa11.31□□□□□ -0.6
CLNK-204ENST00000515667 TULP1O00294 542 aaPredicted RBP11.29□□□□□ -0.6
CLNK-204ENST00000515667 PELP1Q8IZL8 1130 aaKnown RBP11.27□□□□□ -0.61
CLNK-204ENST00000515667 MYT1Q01538 1121 aa11.27□□□□□ -0.61
CLNK-204ENST00000515667 PABPN1Q86U42 306 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLNK-204ENST00000515667 ATAD2BQ9ULI0 1458 aa11.21□□□□□ -0.61
CLNK-204ENST00000515667 ABCC8Q09428 1581 aa11.21□□□□□ -0.62
CLNK-204ENST00000515667 NPM3O75607 178 aaKnown RBP11.2□□□□□ -0.62
CLNK-204ENST00000515667 HRCP23327 699 aa11.18□□□□□ -0.62
CLNK-204ENST00000515667 RANGAP1P46060 587 aaPredicted RBP11.18□□□□□ -0.62
CLNK-204ENST00000515667 PCGF6Q9BYE7 350 aa11.17□□□□□ -0.62
CLNK-204ENST00000515667 BAZ1BQ9UIG0 1483 aaKnown RBP11.14□□□□□ -0.63
CLNK-204ENST00000515667 FAM9AQ8IZU1 332 aaPredicted RBP11.13□□□□□ -0.63
CLNK-204ENST00000515667 TRIM26Q12899 539 aaPredicted RBP11.11□□□□□ -0.63
CLNK-204ENST00000515667 TTBK1Q5TCY1 1321 aaPredicted RBP11.11□□□□□ -0.63
CLNK-204ENST00000515667 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
CLNK-204ENST00000515667 TPRNQ4KMQ1 711 aa11.09□□□□□ -0.63
CLNK-204ENST00000515667 EEA1Q15075 1411 aa11.09□□□□□ -0.63
CLNK-204ENST00000515667 APLP2Q06481 763 aa11.08□□□□□ -0.64
CLNK-204ENST00000515667 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
CLNK-204ENST00000515667 WRNQ14191 1432 aaPredicted RBP eCLIP11.06□□□□□ -0.64
CLNK-204ENST00000515667 NCAPD3P42695 1498 aa11.06□□□□□ -0.64
CLNK-204ENST00000515667 SYNJ1O43426 1573 aa11.06□□□□□ -0.64
CLNK-204ENST00000515667 SOGA1O94964 1423 aa11.06□□□□□ -0.64
CLNK-204ENST00000515667 TAOK2Q9UL54 1235 aa11.04□□□□□ -0.64
CLNK-204ENST00000515667 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
CLNK-204ENST00000515667 RUSC2Q8N2Y8 1516 aa11.01□□□□□ -0.65
CLNK-204ENST00000515667 KLHL34Q8N239 644 aa11□□□□□ -0.65
CLNK-204ENST00000515667 CNKSR2Q8WXI2 1034 aa11□□□□□ -0.65
CLNK-204ENST00000515667 ARXQ96QS3 562 aa10.99□□□□□ -0.65
CLNK-204ENST00000515667 BIVM-ERCC5R4GMW8 1640 aa10.99□□□□□ -0.65
CLNK-204ENST00000515667 TNIKQ9UKE5 1360 aa10.99□□□□□ -0.65
CLNK-204ENST00000515667 TOP2BQ02880 1626 aa10.99□□□□□ -0.65
CLNK-204ENST00000515667 KIF21BO75037 1637 aa10.98□□□□□ -0.65
CLNK-204ENST00000515667 GOLGA3Q08378 1498 aa10.96□□□□□ -0.66
CLNK-204ENST00000515667 ZBTB22O15209 634 aa10.95□□□□□ -0.66
CLNK-204ENST00000515667 CEP162Q5TB80 1403 aa10.95□□□□□ -0.66
CLNK-204ENST00000515667 EIF5BO60841 1220 aaKnown RBP10.94□□□□□ -0.66
CLNK-204ENST00000515667 PRDM2Q13029 1718 aa10.93□□□□□ -0.66
CLNK-204ENST00000515667 CEP164Q9UPV0 1460 aa10.92□□□□□ -0.66
CLNK-204ENST00000515667 CFTRP13569 1480 aa10.91□□□□□ -0.66
CLNK-204ENST00000515667 FOXD4L1Q9NU39 408 aa10.9□□□□□ -0.66
CLNK-204ENST00000515667 HAP1P54257 671 aaPredicted RBP10.88□□□□□ -0.67
CLNK-204ENST00000515667 HOMEZQ8IX15 550 aa10.87□□□□□ -0.67
CLNK-204ENST00000515667 CUX1P39880 1505 aa10.87□□□□□ -0.67
CLNK-204ENST00000515667 PPARGC1BQ86YN6 1023 aaKnown RBP10.85□□□□□ -0.67
CLNK-204ENST00000515667 ERICH3Q5RHP9 1530 aa10.83□□□□□ -0.68
CLNK-204ENST00000515667 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
CLNK-204ENST00000515667 BCANQ96GW7 911 aa10.83□□□□□ -0.68
CLNK-204ENST00000515667 CC2D2AQ9P2K1 1620 aa10.82□□□□□ -0.68
CLNK-204ENST00000515667 RAPGEF2Q9Y4G8 1499 aa10.82□□□□□ -0.68
CLNK-204ENST00000515667 PRXQ9BXM0 1461 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms