RNA–Protein interactions for RNA: ENST00000445883.1

AL590004.3-202, humanhuman

BASIC

Gene AL590004.3, Length 451 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL590004.3-202ENST00000445883 AEBP2Q6ZN18 517 aaPredicted RBP27.08■■□□□ 1.93
AL590004.3-202ENST00000445883 CHIC1Q5VXU3 224 aa25.69■■□□□ 1.7
AL590004.3-202ENST00000445883 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
AL590004.3-202ENST00000445883 PHF23Q9BUL5 403 aaPredicted RBP22.83■■□□□ 1.25
AL590004.3-202ENST00000445883 FOXD1Q16676 465 aa21.55■■□□□ 1.04
AL590004.3-202ENST00000445883 PLPPR3Q6T4P5 718 aa20.51■□□□□ 0.87
AL590004.3-202ENST00000445883 MSH5O43196 834 aa20.2■□□□□ 0.82
AL590004.3-202ENST00000445883 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
AL590004.3-202ENST00000445883 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
AL590004.3-202ENST00000445883 ADRA2BP18089 450 aa20.03■□□□□ 0.8
AL590004.3-202ENST00000445883 POTEDQ86YR6 584 aa19.78■□□□□ 0.76
AL590004.3-202ENST00000445883 MAPK8IP2Q13387 824 aaPredicted RBP18.42■□□□□ 0.54
AL590004.3-202ENST00000445883 SCAF1Q9H7N4 1312 aaKnown RBP18.38■□□□□ 0.53
AL590004.3-202ENST00000445883 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
AL590004.3-202ENST00000445883 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
AL590004.3-202ENST00000445883 HOXD11P31277 338 aaPredicted RBP17.66■□□□□ 0.42
AL590004.3-202ENST00000445883 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
AL590004.3-202ENST00000445883 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
AL590004.3-202ENST00000445883 RNF216Q9NWF9 866 aaPredicted RBP17.51■□□□□ 0.39
AL590004.3-202ENST00000445883 CACNB1Q02641 598 aaPredicted RBP17.33■□□□□ 0.36
AL590004.3-202ENST00000445883 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
AL590004.3-202ENST00000445883 RNF39Q9H2S5 420 aa17.23■□□□□ 0.35
AL590004.3-202ENST00000445883 DNAJC5BQ9UF47 199 aa17.12■□□□□ 0.33
AL590004.3-202ENST00000445883 C1QBPQ07021 282 aaKnown RBP17■□□□□ 0.31
AL590004.3-202ENST00000445883 NPM3O75607 178 aaKnown RBP16.99■□□□□ 0.31
AL590004.3-202ENST00000445883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.28
AL590004.3-202ENST00000445883 KCNA4P22459 653 aa16.61■□□□□ 0.25
AL590004.3-202ENST00000445883 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
AL590004.3-202ENST00000445883 SLC4A2P04920 1241 aa16.25■□□□□ 0.19
AL590004.3-202ENST00000445883 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
AL590004.3-202ENST00000445883 CAPN15O75808 1086 aa16.16■□□□□ 0.18
AL590004.3-202ENST00000445883 DSG3P32926 999 aa16.12■□□□□ 0.17
AL590004.3-202ENST00000445883 APLP2Q06481 763 aa15.99■□□□□ 0.15
AL590004.3-202ENST00000445883 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
AL590004.3-202ENST00000445883 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
AL590004.3-202ENST00000445883 ZNF219Q9P2Y4 722 aaPredicted RBP15.89■□□□□ 0.13
AL590004.3-202ENST00000445883 TRHP20396 242 aaPredicted RBP15.88■□□□□ 0.13
AL590004.3-202ENST00000445883 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
AL590004.3-202ENST00000445883 ABCB7O75027 752 aa15.75■□□□□ 0.11
AL590004.3-202ENST00000445883 MYCNP04198 464 aaPredicted RBP15.72■□□□□ 0.11
AL590004.3-202ENST00000445883 SLC4A1APQ9BWU0 796 aaKnown RBP15.67■□□□□ 0.1
AL590004.3-202ENST00000445883 FOXD4L1Q9NU39 408 aa15.52■□□□□ 0.08
AL590004.3-202ENST00000445883 POTEHQ6S545 545 aa15.49■□□□□ 0.07
AL590004.3-202ENST00000445883 POLA2Q14181 598 aa15.48■□□□□ 0.07
AL590004.3-202ENST00000445883 RBM42Q9BTD8 480 aaKnown RBP15.38■□□□□ 0.05
AL590004.3-202ENST00000445883 NISCHQ9Y2I1 1504 aa15.37■□□□□ 0.05
AL590004.3-202ENST00000445883 ATF5Q9Y2D1 282 aaPredicted RBP15.35■□□□□ 0.05
AL590004.3-202ENST00000445883 ZBTB22O15209 634 aa15.26■□□□□ 0.03
AL590004.3-202ENST00000445883 ZBTB12Q9Y330 459 aaPredicted RBP15.16■□□□□ 0.02
AL590004.3-202ENST00000445883 ATXN8OSP0DMR3 200 aa15.1■□□□□ 0.01
AL590004.3-202ENST00000445883 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
AL590004.3-202ENST00000445883 AKT1S1Q96B36 256 aa15.03■□□□□ -0
AL590004.3-202ENST00000445883 OSCARQ8IYS5 282 aa14.94□□□□□ -0.02
AL590004.3-202ENST00000445883 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
AL590004.3-202ENST00000445883 FBLN2P98095 1184 aa14.76□□□□□ -0.05
AL590004.3-202ENST00000445883 SPDYE2BA6NHP3 402 aa14.71□□□□□ -0.05
AL590004.3-202ENST00000445883 SPDYE6P0CI01 402 aa14.71□□□□□ -0.05
AL590004.3-202ENST00000445883 SPDYE2Q495Y8 402 aa14.71□□□□□ -0.05
AL590004.3-202ENST00000445883 PITPNM1O00562 1244 aa14.68□□□□□ -0.06
AL590004.3-202ENST00000445883 PIP4P2Q8N4L2 257 aa14.68□□□□□ -0.06
AL590004.3-202ENST00000445883 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
AL590004.3-202ENST00000445883 FXR2P51116 673 aaKnown RBP eCLIP14.62□□□□□ -0.07
AL590004.3-202ENST00000445883 CSRNP3Q8WYN3 585 aa14.55□□□□□ -0.08
AL590004.3-202ENST00000445883 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
AL590004.3-202ENST00000445883 SP7Q8TDD2 431 aaPredicted RBP14.5□□□□□ -0.09
AL590004.3-202ENST00000445883 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
AL590004.3-202ENST00000445883 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
AL590004.3-202ENST00000445883 HAX1O00165 279 aa14.43□□□□□ -0.1
AL590004.3-202ENST00000445883 CLEC11AQ9Y240 323 aa14.39□□□□□ -0.11
AL590004.3-202ENST00000445883 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
AL590004.3-202ENST00000445883 PABPN1Q86U42 306 aaKnown RBP eCLIP14.28□□□□□ -0.12
AL590004.3-202ENST00000445883 EVX2Q03828 476 aa14.25□□□□□ -0.13
AL590004.3-202ENST00000445883 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
AL590004.3-202ENST00000445883 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
AL590004.3-202ENST00000445883 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
AL590004.3-202ENST00000445883 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
AL590004.3-202ENST00000445883 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
AL590004.3-202ENST00000445883 GABBR2O75899 941 aa13.94□□□□□ -0.18
AL590004.3-202ENST00000445883 SPDYE4A6NLX3 237 aa13.93□□□□□ -0.18
AL590004.3-202ENST00000445883 STAG3Q9UJ98 1225 aa13.92□□□□□ -0.18
AL590004.3-202ENST00000445883 CD44P16070 742 aaKnown RBP13.85□□□□□ -0.19
AL590004.3-202ENST00000445883 CREBZFQ9NS37 354 aa13.82□□□□□ -0.2
AL590004.3-202ENST00000445883 CLCN6P51797 869 aa13.77□□□□□ -0.21
AL590004.3-202ENST00000445883 ZNF579Q8NAF0 562 aaKnown RBP13.66□□□□□ -0.22
AL590004.3-202ENST00000445883 CCDC180Q9P1Z9 1646 aa13.65□□□□□ -0.22
AL590004.3-202ENST00000445883 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
AL590004.3-202ENST00000445883 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
AL590004.3-202ENST00000445883 PROM2Q8N271 834 aa13.62□□□□□ -0.23
AL590004.3-202ENST00000445883 LHX8Q68G74 356 aa13.61□□□□□ -0.23
AL590004.3-202ENST00000445883 MNX1P50219 401 aaPredicted RBP13.59□□□□□ -0.23
AL590004.3-202ENST00000445883 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
AL590004.3-202ENST00000445883 DCBLD2Q96PD2 775 aa13.54□□□□□ -0.24
AL590004.3-202ENST00000445883 PAK3O75914 559 aaPredicted RBP13.53□□□□□ -0.24
AL590004.3-202ENST00000445883 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
AL590004.3-202ENST00000445883 PHF12Q96QT6 1004 aa13.43□□□□□ -0.26
AL590004.3-202ENST00000445883 ABCC9O60706 1549 aa13.34□□□□□ -0.27
AL590004.3-202ENST00000445883 MIER1Q8N108 512 aa13.31□□□□□ -0.28
AL590004.3-202ENST00000445883 PLEKHG5O94827 1062 aa13.29□□□□□ -0.28
AL590004.3-202ENST00000445883 TSPYL2Q9H2G4 693 aaPredicted RBP13.29□□□□□ -0.28
AL590004.3-202ENST00000445883 CCDC61Q9Y6R9 512 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms