Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 STX4-202ENST00000394998 1498 ntTSL 2 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRAPPC1Q9Y5R8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 Z92544.1-202ENST00000571933 1220 ntBASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRAPPC1Q9Y5R8 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.97□□□□□ -0.01
TRAPPC1Q9Y5R8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 CROCCP1-201ENST00000426910 5675 ntBASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 AL354751.1-201ENST00000412768 1863 ntBASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TRAPPC1Q9Y5R8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRAPPC1Q9Y5R8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms