Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 KRT8P17-201ENST00000453110 1448 ntBASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.22■□□□□ 0.51
HRH3Q9Y5N1 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 MTDHP1-201ENST00000605323 784 ntBASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 AC120498.8-201ENST00000614275 531 ntBASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HRH3Q9Y5N1 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
HRH3Q9Y5N1 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 MIR4497-201ENST00000583208 89 ntBASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 AC112907.3-201ENST00000577781 2400 ntBASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HRH3Q9Y5N1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 BX119927.1-201ENST00000636596 1552 ntBASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 AC099778.1-201ENST00000568593 1911 ntBASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HRH3Q9Y5N1 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
HRH3Q9Y5N1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms