Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 KRT8P20-201ENST00000423953 1409 ntBASIC21■□□□□ 0.95
SALL4Q9UJQ4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL4Q9UJQ4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21■□□□□ 0.95
SALL4Q9UJQ4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21■□□□□ 0.95
SALL4Q9UJQ4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 AP001271.2-201ENST00000624018 1556 ntBASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 KRT16P6-202ENST00000425692 1426 ntBASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SALL4Q9UJQ4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 KRT18P68-201ENST00000392293 1000 ntBASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 AL355472.2-201ENST00000422958 438 ntBASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SALL4Q9UJQ4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 AC231657.2-201ENST00000624556 255 ntBASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SALL4Q9UJQ4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 MIR663A-201ENST00000385250 93 ntBASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 GPX1P1-201ENST00000388829 606 ntBASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.96■□□□□ 0.95
SALL4Q9UJQ4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms