Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PPARGC1AQ9UBK2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PPARGC1AQ9UBK2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 ESRRAP1-201ENST00000400596 1257 ntBASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PPARGC1AQ9UBK2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 POU5F1P3-201ENST00000428824 1078 ntBASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.53■□□□□ 0.88
PPARGC1AQ9UBK2 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 POM121L13P-201ENST00000422362 380 ntBASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PPARGC1AQ9UBK2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PPARGC1AQ9UBK2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PPARGC1AQ9UBK2 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPARGC1AQ9UBK2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PPARGC1AQ9UBK2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PPARGC1AQ9UBK2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms